| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3361 |
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| Symbol | torD |
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| ID | 5609736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4090214 |
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| End bp | 4090861 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934299 |
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| Product | chaperone protein TorD |
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| Protein accession | YP_001475093 |
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| Protein GI | 157376493 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAG AGCCGGTAAC GGACAGTGCT ATCAATCAAG CAAGGGGGAT GGTCTATCAA
CTGCTATCCT CCCTGTTTGC CAAAGAGGTC GATCATCAAC TTCTGCATGA GCTCACCGGT
GAGCGAGCTC AAGGTTTCTT GGCACAACTG GCCAGCGAGC AGGCATTTAA AAGTGATGTC
GATACTCTTG TGTCGGTACT CAATACGCTT AAATCGGATA AAGCCCTGCT GGAGCTTGCC
GCCGATTACT GTGGCTTGTT TCTGGTCGGC ACCAAGCACA GCGCCTCTCC CTACGCGAGC
CTCTATCTGG ATGATGCTCA GACTGGAACC GATGATGAGC CGACTCTGTT TGGAGAGCAA
CATCAGCTGA TGCTACAGTT TTTGAAACAG AGCCAGCTTC AGGTGCAGAG CAGCTTCCCG
GAGCCGGCCG ATCACTTAGC CGTGATCTTG GCTTATGCCG CACACCTATG TAATACCAGT
GATGAGGCTG CACAACTCGA ATTTATTGAG TCATATCTCA ATAATTGGAT AGGAAACTTC
GCCGCCAAGG TCACTCAATG TGATAGCGGC CAGTTTTACA GTGCGCTTAC CCGCTTAACA
CAGAGCTGGA TACAGGCCGA AGTGACAGGT CTGCGGGCAG AGCAGTAA
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| Protein sequence | MNREPVTDSA INQARGMVYQ LLSSLFAKEV DHQLLHELTG ERAQGFLAQL ASEQAFKSDV
DTLVSVLNTL KSDKALLELA ADYCGLFLVG TKHSASPYAS LYLDDAQTGT DDEPTLFGEQ
HQLMLQFLKQ SQLQVQSSFP EPADHLAVIL AYAAHLCNTS DEAAQLEFIE SYLNNWIGNF
AAKVTQCDSG QFYSALTRLT QSWIQAEVTG LRAEQ
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