| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3358 |
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| Symbol | |
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| ID | 5609830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4086215 |
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| End bp | 4086385 |
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| Gene Length | 171 bp |
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| Protein Length | 56 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934296 |
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| Product | periplasmic nitrate reductase NapE |
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| Protein accession | YP_001475090 |
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| Protein GI | 157376490 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02972] trimethylamine N-oxide reductase system, TorE protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACATC AAGAAGCCTC AGAATCAGCA AAACAAGTGA AATCGAAGGA GCTTAAAGCC
CTGAGTGTCA TCATATTCCT GCTTTTCCCA ATTCTCACCA TCACAGGTAT CAGTGCCTAC
GGATTTATTA TCTGGATGAT CCAGGCATTT GGTGGCGTCG TCGCCCATTA A
|
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| Protein sequence | MAHQEASESA KQVKSKELKA LSVIIFLLFP ILTITGISAY GFIIWMIQAF GGVVAH
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