| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3268 |
|---|
| Symbol | |
|---|
| ID | 5614096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | + |
|---|
| Start bp | 3967999 |
|---|
| End bp | 3968361 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640934206 |
|---|
| Product | antibiotic biosynthesis monooxygenase |
|---|
| Protein accession | YP_001475000 |
|---|
| Protein GI | 157376400 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1359] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.68542 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.310475 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACTC GCGTTTATGT TATCGCACAA TTTCGCCCAA AAGCCGGTAA AGAATCTGAA
TTGTTTGAAG TATTAAAGGC ACTCGAGCCA GATGCTCTGC GTGAGCAAGG CTGCATTCAA
TATATGCTCA CACGTCAGAT TGACCATCCC AGCGCCACCC GGACTAACTA CCCCATCGTG
TTTAATGAAA TATGGGCCGA TGGTGAGAGT TGGGCGGCAC ATGGCCGCCG TAAACAGATA
CACCACTTCT TCAATACACA GGTCATTGCA AAAGATGGCC TGGTCGATGA TGCCATCGTC
ACCGCATACA CGGACGAAGG ATACGACTAC GACGCCCCCA TCTTTGGATT AGGCGCCAAA
TAA
|
|---|
| Protein sequence | MSTRVYVIAQ FRPKAGKESE LFEVLKALEP DALREQGCIQ YMLTRQIDHP SATRTNYPIV
FNEIWADGES WAAHGRRKQI HHFFNTQVIA KDGLVDDAIV TAYTDEGYDY DAPIFGLGAK
|
|---|
| |