| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3171 |
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| Symbol | |
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| ID | 5610718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3828741 |
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| End bp | 3829754 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934109 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474903 |
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| Protein GI | 157376303 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAA TAACGACCCT CAGCCAGTTC CTGACAACAG CTAATACACA ATTCCAAGTC
TATGATATGG GAAGAAGAGT CCAGCACATC GACATGATGG CGTTTAACGA AATAGAAAGT
CTGAACTCAC CTTATCCATC TCCGCTACAA GGGCATGCAC AATTTGCTAT CGTATTTTGG
GATGCCAGCC AACAGCACTA TATCTGGTTT TTAAAATTAC CATTAGATGA ACGAGGCTTG
TTATCACCGG CACCAAGAAC CCAGTTTATA AAGATGATTG TGGAGGCTCT TGGACGAGAC
CCGGCGCAGA CATTATCAGA AGAACAGCAA CAGAAATTGG CTAACCACCC ATTTGCATTT
AAACCTTCGG CAGAAAAACT CGCGATATTT AACGCCTTGG TACGTAAGCA GCTAGGTGAT
AAAGCCTCAC CTCAATATGA GTTTGCCTAC CAATATATTT CCGGGCAGGT GAAGACGGAA
AACTGGCAAG AAATTGGGCT TCAGGGCATT GCGGACATCT GTGTTCGTTC CAATGAGTTA
GATCACCTTA ACCATCTTAA AGCTTGTTTT GAATATGCCT CGACAGAAGT ACAGATCGCA
ATCTGTCAGT GTCTGGAGCA TTTAACAATA GATAAAGAAC TGGCTGAAAT CATATTAGCT
AAGTTAATCG CTGCTGATAA GACAACAAAA CTCTATTACC TAAGAGCGCT GGCATCACAT
TCATCGCTGA CCCAAGAGGC AGTCTTGCAT CTAGCCCAAG GTCAGTTACT CAATGCCGAT
GCGTTGATCA CCATAGCCGC CAGAAACTGG ACTGTACTTA AACACGATGC AACCCGCACA
ATTTACTTAG AAGCACTCGC GACGCAGGAA CAGCACTTCT TTAATCAAAT TTTTGCTGAT
ATTGTGGTGA TCCCTGTGTT ACGAACTCAA ATGCTTGCCG AGCTTCGTAA CCCGAATAGA
AGTCCGCAGC TATCTGCTGC CATTGGTGGA TTATTTAAGG TTACAAAAGC ATGA
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| Protein sequence | MTEITTLSQF LTTANTQFQV YDMGRRVQHI DMMAFNEIES LNSPYPSPLQ GHAQFAIVFW
DASQQHYIWF LKLPLDERGL LSPAPRTQFI KMIVEALGRD PAQTLSEEQQ QKLANHPFAF
KPSAEKLAIF NALVRKQLGD KASPQYEFAY QYISGQVKTE NWQEIGLQGI ADICVRSNEL
DHLNHLKACF EYASTEVQIA ICQCLEHLTI DKELAEIILA KLIAADKTTK LYYLRALASH
SSLTQEAVLH LAQGQLLNAD ALITIAARNW TVLKHDATRT IYLEALATQE QHFFNQIFAD
IVVIPVLRTQ MLAELRNPNR SPQLSAAIGG LFKVTKA
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