| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3113 |
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| Symbol | |
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| ID | 5613891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3750984 |
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| End bp | 3754076 |
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| Gene Length | 3093 bp |
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| Protein Length | 1030 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934051 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001474845 |
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| Protein GI | 157376245 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAGG CACTTGTAGA AAACGGACGT CTGGCAAGCT TAGTCATTGC ACTACTCATT
GTCGCCGGAT TAGGCGCAAT ATCCAGCCTG CCGAGAATGG AAGATCCTGA TATCACCAAT
CGGTTCTCAT CAGTGATCAC TCACTATCCG GGCGCATCGG CCGAACGCGT CGAAGCCTTA
GTGACCGAGG TATTGGAAAA TCAACTGAGA CGGCTCGAAG AGCTCAAGCT GGTGCAATCG
ACCTCACGCC CCGGAATATC TGTGATACAG CTCGAGTTAA AGGACAGTGT CATCGATACC
GATCCCGTCT GGTCAAGAGC GAGAGATCTC GTTGCCGACT CAAAACCTTT GTTACCCCAG
CCGGCTCAGA ACGCCATATT GGACGATCAG GTCGGCTATG CTAATACTGC CATTCTGGGA
CTCGTGTGGA AAGGTGGCGG AGAAGCTCGC ACCGATATGC TTAACCGCTA CGCTAAAGAG
CTACAGAGCA GATTAAGACT GCTTAGCGGC ACCAATTTCG TGAAACTCTA TGGCGCCCCT
ACCGAAGAAA TTTTAGTCCA GTTAGATGGA GACAAAGTTA ACCGCCTGAA GCTATCTCCG
GCCGCAGTGG CACAAATTCT TGGCAATGCC GACACTAAAG TCTCTGCCGG CGAAATCAAT
AACAATAGTT TCAGAGCCTT AATCGAAGTA TCCGGCGAGT TAGACTCGGT ATCCCGGGTG
CGTCAAGTCC CGCTTAAAAT TGATGAACAG GGACAGATCA TCCGCTTAGG GGATATTGCC
ACCATCTCAA GGCAAGCCAA AACCCCGGCA AGTACCATAG CCCTAATCGA GCAAGATCAA
GGCGTGATGG TTGCGGCCCG CATGCTCAAT AACACGCGCG TCGATCTCTG GTTAGCTAAG
GTCAGAGATG AAGTTGAGGC ACTGCAAACA AGTATTCCGG CCAACATCGA AATTCAATGG
CTGTTCGATC AAGAAAGTTA TACCAGCGAG CGTCTGGGCG ATCTGGTGGG TAGCTTACTC
TTAGGTTTCA TCATCATATT AGTTGTCTTG ATGCTGACTC TGGGGTTACG TAATGCGGTA
ATCGTCTCCC TTTCTCTGCC TCTCACGGCC CTCTTTACCC TCGCCTGCAT GAAATATATC
GGTCTGCCAA TCCATCAAAT GTCAGTCACT GGCTTAGTGG TGGCGCTCGG TATCATGGTC
GATAATGCGA TTGTTATCGT CGATGCCATT TCACAGCGCA GACAACAGGG GATGACAAGG
TTAGATGCGG TGAGTAAGAC GCTGCATCAC CTCTGGTTAC CGTTAGCGGG CTCGACCATC
ACCACCATGC TCGCCTTCGC ACCTATCGTA TTGATGCCGG GGGCGGCCGG TGAGTTTGTC
GGTGGAATCG CTATCTCTGT GATGTTCGCC TTGGTGGGTT CATACCTTAT TTCACACACC
TTGATTGCCG GCCTCGCCGG GCGCTTTGGT GTCGAAGGTG AACAGCAACA ATGGTATCAG
GCGGGTATCC GCCTCCCCTT CGTAAGCAAA CTGTTTAAAT TAAGTTTAAG AACCGCGCTG
AAACGTCCGC TGTTATCCGG TCTCATAATC GGCATCTTCC CCATCTTAGG TTTTATCGCT
GCGGGTCAGA TGACAGAACA GTTCTTTCCG CCATCGGATC GCGACATGTT CCAGATAGAG
GTTTACCTCT CCCCGCACGC GAGTATAGAA AGCACACGAG GCCGCGTTGA AGAGATTGAT
AAGCAGCTAC GAAAAACAGC GGGAGTCGAG CGTATCGATT GGGTCGTAGG TGGTAACACC
CCCTCTTTTT ATTACAACCT GTTACAGCGA CAGCAAGGCG CCAGTAACTA TGCCCAAGCT
ATGGTTAAAG TTACAGACTT TGATACCGCA AACCGATTAA TTCCACGGCT TCAACAGAGT
CTGGATCTCG CTTTTCCCGA GGCGCAGATA TTGGTAAGAA AATTAGAACA GGGTCCCCCT
TTCAACGCGC CTGTTGAGTT GAGAGTATTT GGCCCGAATT TAGACCAACT CAGGCTCATC
GGAGATGAAG TCAGACGCAT TTTATCCAAT ACCGCCGATG TTATTCATAC TCGAGCGACC
TTAAGTGCCG GCGCACCTAA GGTGTGGTTC CAGATCAATG AAGATGCCAG CTTAATGAGT
GGACTCAATT TAACTGAGAT AGCCAACCAA ATCCAGATGG CCACCACAGG CATTAAAGGC
GGGAGTATAC TGGAGCAGAC AGAATCTCTG CCAGTCAGGG TTCGACTACA TGACAGCACG
CGGGAGCAGC AAACTAAACT GTCGGAAATC AATCTCGTCT CGCCTTCGGG CTCTGAGATC
CCCCTTTCAG CCCTGTCCAC TAACCGAATC GAAGTCAGCC GCGGCGCAAT CCCCCGCAGA
GATGGTCACA GAGTCAATAC CATCGAAGCT TACCTGGTCA GTGGAGTCCT GCCTCAACAG
GTGCTCGACG ATGCCAAAGT TAACATAGAT CAACTGGTGC TTCCCGCCGG TTATCATATT
GAGGTGGGTG GCGAGAGTGC GAAACGAAAC GAAGCCGTGG GCAACCTGCT TTCAAATGTC
GTATTAGTCG TGACCTTACT GCTGGCCACC GTTGTTCTCT CCTTTAACTC CTTTAGATTA
ACGGCCATCA TTCTCTTCAG TGCCCTTCAA TCGGCGGGGC TTGGCCTGTT GGCGGTATAT
ACCTTTGGCT ATCCATTTGG TTTCACCGTG ATCATCGGCC TGCTCGGACT TATGGGTCTG
GCCATCAATG CGGCGATTGT TATCCTGGCA GAACTCGAAG AGCTGCCCGA TGCGAGATCA
GGCAAGATAG AATCAATTGT CAGCGTCGTT TCCGGCTGTG GCAGACATAT TGGTTCCACG
ACTATCACGA CAATTGGTGG CTTCCTGCCC CTTATCATTG CCGGCGGTGG TTTTTGGCCC
CCCTTTGCCA TCGCCATTGC GGGCGGGACA CTACTGACGA CATTGCTCTC GCTGGTTTGG
GTGCCGACCA TGTATCAACT CATTATGAAA CCGGCAAAGA AACAGCGGTT AACACCTTCC
CAATTGGGCA CAGAAGCTAA GATAGAGGTC TAG
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| Protein sequence | MIKALVENGR LASLVIALLI VAGLGAISSL PRMEDPDITN RFSSVITHYP GASAERVEAL
VTEVLENQLR RLEELKLVQS TSRPGISVIQ LELKDSVIDT DPVWSRARDL VADSKPLLPQ
PAQNAILDDQ VGYANTAILG LVWKGGGEAR TDMLNRYAKE LQSRLRLLSG TNFVKLYGAP
TEEILVQLDG DKVNRLKLSP AAVAQILGNA DTKVSAGEIN NNSFRALIEV SGELDSVSRV
RQVPLKIDEQ GQIIRLGDIA TISRQAKTPA STIALIEQDQ GVMVAARMLN NTRVDLWLAK
VRDEVEALQT SIPANIEIQW LFDQESYTSE RLGDLVGSLL LGFIIILVVL MLTLGLRNAV
IVSLSLPLTA LFTLACMKYI GLPIHQMSVT GLVVALGIMV DNAIVIVDAI SQRRQQGMTR
LDAVSKTLHH LWLPLAGSTI TTMLAFAPIV LMPGAAGEFV GGIAISVMFA LVGSYLISHT
LIAGLAGRFG VEGEQQQWYQ AGIRLPFVSK LFKLSLRTAL KRPLLSGLII GIFPILGFIA
AGQMTEQFFP PSDRDMFQIE VYLSPHASIE STRGRVEEID KQLRKTAGVE RIDWVVGGNT
PSFYYNLLQR QQGASNYAQA MVKVTDFDTA NRLIPRLQQS LDLAFPEAQI LVRKLEQGPP
FNAPVELRVF GPNLDQLRLI GDEVRRILSN TADVIHTRAT LSAGAPKVWF QINEDASLMS
GLNLTEIANQ IQMATTGIKG GSILEQTESL PVRVRLHDST REQQTKLSEI NLVSPSGSEI
PLSALSTNRI EVSRGAIPRR DGHRVNTIEA YLVSGVLPQQ VLDDAKVNID QLVLPAGYHI
EVGGESAKRN EAVGNLLSNV VLVVTLLLAT VVLSFNSFRL TAIILFSALQ SAGLGLLAVY
TFGYPFGFTV IIGLLGLMGL AINAAIVILA ELEELPDARS GKIESIVSVV SGCGRHIGST
TITTIGGFLP LIIAGGGFWP PFAIAIAGGT LLTTLLSLVW VPTMYQLIMK PAKKQRLTPS
QLGTEAKIEV
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