| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3055 |
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| Symbol | |
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| ID | 5612334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3692464 |
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| End bp | 3692733 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933992 |
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| Product | flagellar biosynthetic protein FliQ |
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| Protein accession | YP_001474787 |
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| Protein GI | 157376187 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
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| TIGRFAM ID | [TIGR01402] flagellar biosynthetic protein FliQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.341394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.194371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCCTG AATCACTGGT CGATATATTC CGAGAAGCGT TAACCGTTAT CGTGACAATT
GTCTCCTTGA TCATTGTTCC TGGTCTTATC ATAGGTCTCG TTGTTGCCGT TTTTCAGGCG
GCAACCTCAA TTAATGAGCA GACGTTGAGT TTCTTACCAC GTTTGCTTAC TACCTTGTTT
GCACTAATGT TTCTTGGCCA TACACTGATA CAAACGATGA TGGAGTTCTT CATTCAGATG
GTAAATATGA TCCCGCAGGT TATCGGGTGA
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| Protein sequence | MNPESLVDIF REALTVIVTI VSLIIVPGLI IGLVVAVFQA ATSINEQTLS FLPRLLTTLF
ALMFLGHTLI QTMMEFFIQM VNMIPQVIG
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