| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2972 |
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| Symbol | |
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| ID | 5610548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3600475 |
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| End bp | 3601419 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640933912 |
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| Product | MviM protein |
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| Protein accession | YP_001474707 |
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| Protein GI | 157376107 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.82127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT TTGCACTGAT AGGTACTGCT GGCTATATCG CACCGAGACA TTTGAATGCG
ATCCGCGATA CGGGCAACGA ACTCACTGTC GCCATGGACA TCAATGACTC GGTTGGCATT
ATGGATATGC ATTTTCCAGA GTCTGAGTTT TTTACAGAGT TCGAAGAGTT TGCCGCTTAT
GTTGAAGATG AAGCCATTAA GGGTAATAAG TTAGATTATA TCTCTATCTG TTCACCTAAC
TATCTTCACG CACCACATAT GAAGTTTGCT TTGAAAAATG GCATCGATGT TATTTGTGAA
AAGCCGATGG TGTTGCACTC CGATGAGATA GACACTTTAG CTCAGTATGA AAAAAAATAC
GGTGCAAAAG TGAATACCAT TTTGCAACTG CGCCTACATC CTTCAATTCT TGCTCTTAAA
GAGAAAGTGG CAAATGCGCC TAAAGATAAG GTGTTCGATG TAGAGCTTAC TTACATGACC
TCACGTGGTA AGTGGTATCT GAAATCATGG AAGGGTGATA ATGCTAAGTC TGGTGGTGTC
GCCACTAATG TCGGTGTACA TTTTTACGAT ATGCTTCATT TCATCTTCGG TGATCTTAAG
CATAATGAAG TTCATTATCG TGATGAGCAG ACTGCTGCAG GTTACCTCGA ATATGCTCAG
GCTCGCGTTA AGTGGTTCTT GTCCATTGAT GCGAATAATC TACCAGATAA TGCCGTTCAA
GGTGAGAAGA AGACCTATCG CAGTATTTTG ATTGGCGATG AAGAGCTAGA GTTTTCCGGT
GGTTTTACCG ACCTGCATAC TCAAAGCTAT GAACGGATCT TAGATAACAA AGGTTATGGT
CTGGAAGACA ATCGAGTTGC GATTGAGACT GTGGAAATTA TCAGAGAACA AGAGCTAACT
TCTAATCCTG AAAACTACCA CCCGTTAATG AATAAGTTAG TTTAA
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| Protein sequence | MKKFALIGTA GYIAPRHLNA IRDTGNELTV AMDINDSVGI MDMHFPESEF FTEFEEFAAY
VEDEAIKGNK LDYISICSPN YLHAPHMKFA LKNGIDVICE KPMVLHSDEI DTLAQYEKKY
GAKVNTILQL RLHPSILALK EKVANAPKDK VFDVELTYMT SRGKWYLKSW KGDNAKSGGV
ATNVGVHFYD MLHFIFGDLK HNEVHYRDEQ TAAGYLEYAQ ARVKWFLSID ANNLPDNAVQ
GEKKTYRSIL IGDEELEFSG GFTDLHTQSY ERILDNKGYG LEDNRVAIET VEIIREQELT
SNPENYHPLM NKLV
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