| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2964 |
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| Symbol | |
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| ID | 5610621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3592353 |
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| End bp | 3593267 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640933904 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474699 |
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| Protein GI | 157376099 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000002161 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0760425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAACATTC TTTTAGTCAC TAATATGTAT CCGAGTGAGG GTGATGTCAG CTGGAGAGGT
TCATTTGTTA AAGAACAAGT TGATATGTCC CAAACTCATA ATAAAGACAT CAACTACGAC
ATAGTGCATA TTAAAGGTCG TGTATGTGGC GGGAGTAATT TAAATTACTT GCTGGCACCA
CTGTTGATTT TAAAAAAAAT GCTGTTTAAT AAGTTTGATG CAATTCATTG TCACCATGCT
TTTTGTGTCT TGGTATCATC TCTTTTTTTT AATAAAATTA TTTACACTGT TCATGAAGGC
GAACTTAATA ACCATAAAAC AAGTATTTTT ATAAAGCTGG CCATATCGCT GTCAAATAAA
GTCATTTTTG TTAATCATGC AGAGTTTTTA AAGTCGACGC ATAAACGAAA ATACTTCTTA
CCATGTGGTA TCGATTTTTC TTTTTTTAAA TCTTCAGATC TTGCCCCTAA TGGTTGTATT
CTATTCCCGG CAGATCCGAA CAGAGTCGAA AAAAATGCCA GCCTACTTCG TGAAGCTGAA
GCTGTAATTA CTGCGGACTA TCCCAATGTA AAGTTTATAT ATGGTGGAAA GATACCGAGA
GAGGAGATGC CTTACTTAAT GAGGCAATCA TTATTGGTTG TTACTATAGG TAAGTTTGAG
TCTGATGGAC TCGTTCTAAA GGAAGCTATG GCTTCTAATG TGCCTGTTGT TAGTACAGAT
GTAGGCAATG CGAGTTATTA CTTAAACGAG CAGTCAGGTC TTATCTGTTC AGCTAATACA
GAGTCTTTGA CGGCAGCTAC TCTTAAAATC TTGGGTGATA GGGAGTCCTA CTTAAGGGGA
AGGGAACGTT TATCCTCACT TCATGTCGAT CAGGAAAAAA CAGTTACTAA ATTAGCCAAG
ATCTATCAAA GTTGA
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| Protein sequence | MNILLVTNMY PSEGDVSWRG SFVKEQVDMS QTHNKDINYD IVHIKGRVCG GSNLNYLLAP
LLILKKMLFN KFDAIHCHHA FCVLVSSLFF NKIIYTVHEG ELNNHKTSIF IKLAISLSNK
VIFVNHAEFL KSTHKRKYFL PCGIDFSFFK SSDLAPNGCI LFPADPNRVE KNASLLREAE
AVITADYPNV KFIYGGKIPR EEMPYLMRQS LLVVTIGKFE SDGLVLKEAM ASNVPVVSTD
VGNASYYLNE QSGLICSANT ESLTAATLKI LGDRESYLRG RERLSSLHVD QEKTVTKLAK
IYQS
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