| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2901 |
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| Symbol | |
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| ID | 5613817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3505145 |
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| End bp | 3505615 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933820 |
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| Product | dual specificity protein phosphatase |
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| Protein accession | YP_001474636 |
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| Protein GI | 157376036 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0160426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCATC TATTTTGGTT AGTTGAAGAC AAAATTGCTG GACGCAGTGG GCCTAATAAG
GAAGCATGGG ATCTGAATGA AATTAAACGT TCAGGTATCG GGGCTATACT CTCTGTAAAT
GGAGGCGAAG CTTGTGAGCC TGACGCATTT ACTCAGGCGG ATTTGGCGTA TGCGTGTATC
CCCTTTTCCA GTAATGTACC GCCTAAAGAT GAAGACTTAG GCTTGTGTGT CGAGCAACTG
CCTAAGGCGT TGGCTTTTAT TCGTGAATGT GAAGCTAACA ATACGCCTGT GATGATCCAC
TGCCGCTCAG GTAAAGACAG AACGGCCTTG TTAATGGCTT ACTACCTGAT GGAGAATGGG
GCTGCGCCTT TGCATGCCGT TAGTCAAGTT CGTGCCGCAA GGGACATTGC TTTTAGCGCC
GAAGGTTGGG ACCAGTTTGC TTTCGACGTG CTTTATGCTT TACAGGAATA A
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| Protein sequence | MQHLFWLVED KIAGRSGPNK EAWDLNEIKR SGIGAILSVN GGEACEPDAF TQADLAYACI
PFSSNVPPKD EDLGLCVEQL PKALAFIREC EANNTPVMIH CRSGKDRTAL LMAYYLMENG
AAPLHAVSQV RAARDIAFSA EGWDQFAFDV LYALQE
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