| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2860 |
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| Symbol | |
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| ID | 5611622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3459794 |
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| End bp | 3460150 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933779 |
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| Product | TraR/DksA family transcriptional regulator |
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| Protein accession | YP_001474595 |
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| Protein GI | 157375995 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.689813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000253321 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGAGCATAT CCCATATCAG ACATGAATTG TCGCAGCTCG AAACACATCT CAGGAAAGAG
ATCGGTGCGC TTGCAGAAAT CAATCAAGTA TCTCTGGAAG CTGAAACATC CTCTCTTTGC
GAAATTATTG AGGTACTGAC CAAAGCCGGC CTATGTGATC ATCCGCTATT TTCAAAATTG
ACGAAACTGG ATGCAGCCAT CTGCCAACTC GATATTGGTG TATATGGTTT ATGCTCTGAT
TGCGAAAGTG AGATCGAGTC TGAACGTTTA ACTCTGGATC CAATAGAGCA AAGGTGTGCT
AATTGCGCCG AACAATATGA GCACGAGCAT AGACAAGAGC TTAGGCTGAC ACATTAA
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| Protein sequence | MSISHIRHEL SQLETHLRKE IGALAEINQV SLEAETSSLC EIIEVLTKAG LCDHPLFSKL
TKLDAAICQL DIGVYGLCSD CESEIESERL TLDPIEQRCA NCAEQYEHEH RQELRLTH
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