| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2821 |
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| Symbol | |
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| ID | 5613964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3405590 |
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| End bp | 3408853 |
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| Gene Length | 3264 bp |
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| Protein Length | 1087 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933740 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001474556 |
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| Protein GI | 157375956 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000195255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.2689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATTA TAAAAACATC AGTAAACCGA CCTGTCACCG TATGGATGTT CATGTTTGCC
GTTATCTTGT TCGGTATGGT TGGTTTCTCT CGCTTGGCGG TAAAGCTGCT GCCGGATCTG
AGCTACCCCA CCATTACAAT CCGAACCCAG TATATCGGCG CGGCTCCTGT TGAAGTCGAA
CAGCTGGTTT CAAAACCTAT CGAAGAGTCG GCCGGTATCG TAAAGGGGCT GCGTAAGATC
AGTTCCATCT CCCGCTCCGG CATGTCAGAT GTCGTACTCG AGTTCGAGTG GGGCACCGAC
ATGGATATGG CCAGTCTGGA TGTGAGGGAA AAAATCGATA CGATTGAGTT ACCTCTGGAC
GTTAAGAAGC CGCTACTACT ACGCTTTAAC CCAAATCTGG ATCCTATCGT TCGTCTGGCC
CTTTCGGTAC CCGATGCAAG CGATACCGAG CTTAAACAGA TGCGTACCTA CGCTGAAGAG
GAGCTTAAAC GTCAGTTAGA GTCATTAACT GGTGTGGCTG CTGTCAGGTT ATCCGGTGGG
TTACAGCAAG AAGTTCACAT TCAACTTAAT CAGGAAAAAC TGACTCAACT TAATTTAAAT
GCGGCACTTA TCCGCAACCG TATCGCCGAA GAAAATATTA ACCTCTCGGC AGGTAAAGTG
ATCCAGGGGG ATAAAGAATA TCTGGTCAGA ACGCTAAATC AGTTCAACTC CCTCGAAGAG
TTAGGCCAAA TCGTCGTGTA TCGTGACGCG CAGACATTAG TTCGACTGTT CGAAGTCGCC
GAAATTGTCG ACGCACACAA AGAGCGTAAC GACATTACCC GCATCGGTGA TCAGGAATCG
ATTGAACTCG CTATCTACAA AGAGGGTGAC TCAAACACCG TGGCCGTTGC CCGTAAAGTC
ACCGCTGCAC TTGAAAAGTT AAATGAAGAG GGCAGCAAGT CTGAACTCAA GGTTATTTAC
GATCAATCAG AATTTATCGA AAGTGCCGTC AGTGAAGTCA CCTCTGCGGC CTTGATCGGT
AGCTTGCTAT CGATGTTAAT TATCTATCTA TTTTTGAGAG ATATCATTCC AACATTGATC
ATTTCAATCT CGATACCCTT TTCGGTTATT GCTACCTTCA ACATGATGTA TTTCGCTGAC
ATCAGTTTAA ATATCATGTC CCTGGGAGGC ATAGCGCTTG CGGTTGGTTT ATTGGTCGAC
AATGCCATTG TGGTCCTCGA GAATATCGAT AGATGCCGCT CCCTTGGCAT GAATAAACTC
GATGCGGCAG TAACAGGAAC CAAAGAGGTC GCCGGGGCCA TCTTCGCTTC GACGCTGACA
ACATTGGCCG TGTTTGTTCC ACTGGTCTTC GTCGACGGCG TGGCCGGGGC ACTGTTTTCG
GATCAGGCAT TGACCGTCAC CTTCGCACTG TTAGCCTCTC TGCTCGTGGC ATTAACCACC
ATTCCTATGC TGGCATCCCG CGAAGGATTT AAGGCACTGC CACCATTGGT CGAAAAAACA
GTCAAACCTA AGCCGGAAAC CCGGGTCGCC AAGATCAAGC ACTACAGTGC AACCGTGTTC
TCTTTCCCGT TTGTTCTGCT GTTTAGCTAT CTGCCAAGTC TATTACTGAC ATTGGCCCTG
CTTATCGGTC GCTTCGTCTC CTGGGTAACT GGTCTGGTTA TGCGCCCGCT TAGCTTCGGT
TTCAACTGGC TCTACCATAA ATTAGAGTCT GTCTATCATG TTCTTCTTGC TCAGGCGCTT
AAATTTAAAG TGCTGACAAT GAGTATCGCA ATTCTGGTCA CCCTCGGTGC AGCCTCACTG
CTGCCTAAAT TGGGAATGGA ACTGATCCCA CCGATGAATC AGGGTGAATT CTATGTCGAA
GTTTTATTAC CGCCAGGAAC TGAAGTCTCT GAAACAGACA GGGTATTGCG CAAACTAGCC
CTATCGATTA AAGACAGGGA AGATGTTAAA CACGCTTATA GCCAAGCGGG TAGCGGCGGC
TTAATGACGT CAGACACTTC TCGTGGTGGT GAAAATTGGG GACGCCTACA GGTCGTACTC
GCCGATCATA GCGCCTTTGA TGCCGTGGCT ACGGTATTGC GTACAACCGC GATGCGTATC
CCGGAGCTGG AGGCTCAAAT TCAACATCCT GAGCTATTTA GCTTTAAGAC GCCGTTAGAG
ATAGAGTTGA TCGGCTATGA TCTGGCTCAG CTTAAAAATA CCGCCGATAA TCTGGTCGAT
GCCCTCTCCG ACTCTGACCG ATTTGCCGAT ATCAATACCA GTCTGCGTGA CGGTCAACCT
GAGCTTAGCA TTCGTTTTGA CCATGAACGG TTAGCCGCGC TGGGAATGGA TGCACCCACG
GTTGCAAACC GAATCGCACA ACGCATCGGT GGCACCATCG CCAGCCAATA TACGGTGAGA
GATCGTAAGA TCGACATCTT GGTCAGAAGT GCAATCGAAG AGCGCGATCA GATAAGCGAC
ATCGACTCAA TGATTGTTAA CCCTGATAGC AGTCATCCTA TTGCTCTGAG CGCCGTGGCC
GATGTCTCAT TGAAGTTAGG TCCATCGGCG ATCAACCGTA TCAGCCAGCA AAGAGTGGCG
ATAGTCTCCG CTAACCTGGC CTATGGCGAT CTTAACGAAG CCGTTTTGGA AGCCAGAGAT
ATTCTGGCTC AGCAGACATT ACCGACTTCG ATTCAGGCCC GCTTCGGTGG CCAGAACGAG
GAGATGGAGC ACTCTTTCCA ATCGCTGCAA ATCGCACTCG TGTTGGCCGT GTTCTTAGTT
TATCTCGTCA TGGCGAGTCA GTTTGAATCA TTATTGCACC CACTGCTTAT TCTTATTGCG
GTACCTATGG CGGTTGGAGG TAGTGTGTTC GGACTCTATA TCACTCAGAC TCACTTAAGT
GTCGTAGTGT TTATCGGTCT TATCATGCTC GCGGGTATTG TGGTGAATAA TGCCATCGTT
CTGGTCGACA GGATTAACCA ACTCAGGCAG GAGGGGCGCG ATAAGATGAA TGCCATTTCA
GAAGCGGCAA AATCACGCCT TCGCCCGATT ATCATGACGA CATTAACGAC GGCACTGGGT
TTATCGCCTA TGGCTCTCGG TCTTGGAGAT GGGTCTGAGG TTCGCGCACC AATGGCCATT
ACCGTGATCT TTGGCCTGAC GCTGTCAACC CTGCTCACCT TAGTGGTTAT CCCTGTACTG
TATGCGCTTT TCGACCGCAA AGAGTTCAAG GTGAAGAAGA GCGACACTAA CCCAGAGGTT
GCAACTGTGG GAGGTCAGGC ATGA
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| Protein sequence | MSIIKTSVNR PVTVWMFMFA VILFGMVGFS RLAVKLLPDL SYPTITIRTQ YIGAAPVEVE
QLVSKPIEES AGIVKGLRKI SSISRSGMSD VVLEFEWGTD MDMASLDVRE KIDTIELPLD
VKKPLLLRFN PNLDPIVRLA LSVPDASDTE LKQMRTYAEE ELKRQLESLT GVAAVRLSGG
LQQEVHIQLN QEKLTQLNLN AALIRNRIAE ENINLSAGKV IQGDKEYLVR TLNQFNSLEE
LGQIVVYRDA QTLVRLFEVA EIVDAHKERN DITRIGDQES IELAIYKEGD SNTVAVARKV
TAALEKLNEE GSKSELKVIY DQSEFIESAV SEVTSAALIG SLLSMLIIYL FLRDIIPTLI
ISISIPFSVI ATFNMMYFAD ISLNIMSLGG IALAVGLLVD NAIVVLENID RCRSLGMNKL
DAAVTGTKEV AGAIFASTLT TLAVFVPLVF VDGVAGALFS DQALTVTFAL LASLLVALTT
IPMLASREGF KALPPLVEKT VKPKPETRVA KIKHYSATVF SFPFVLLFSY LPSLLLTLAL
LIGRFVSWVT GLVMRPLSFG FNWLYHKLES VYHVLLAQAL KFKVLTMSIA ILVTLGAASL
LPKLGMELIP PMNQGEFYVE VLLPPGTEVS ETDRVLRKLA LSIKDREDVK HAYSQAGSGG
LMTSDTSRGG ENWGRLQVVL ADHSAFDAVA TVLRTTAMRI PELEAQIQHP ELFSFKTPLE
IELIGYDLAQ LKNTADNLVD ALSDSDRFAD INTSLRDGQP ELSIRFDHER LAALGMDAPT
VANRIAQRIG GTIASQYTVR DRKIDILVRS AIEERDQISD IDSMIVNPDS SHPIALSAVA
DVSLKLGPSA INRISQQRVA IVSANLAYGD LNEAVLEARD ILAQQTLPTS IQARFGGQNE
EMEHSFQSLQ IALVLAVFLV YLVMASQFES LLHPLLILIA VPMAVGGSVF GLYITQTHLS
VVVFIGLIML AGIVVNNAIV LVDRINQLRQ EGRDKMNAIS EAAKSRLRPI IMTTLTTALG
LSPMALGLGD GSEVRAPMAI TVIFGLTLST LLTLVVIPVL YALFDRKEFK VKKSDTNPEV
ATVGGQA
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