| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2790 |
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| Symbol | |
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| ID | 5613312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3363468 |
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| End bp | 3364202 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640933709 |
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| Product | protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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| Protein accession | YP_001474525 |
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| Protein GI | 157375925 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAAT TACTGTTTCT GTTTATTACC CTTATCCTAT TCGAACAGCA GAGCCTTGCG
GCATTACCCA CGGGTGATTC CGAAAAATAT CTCCGCGCCA GAGAGAGTAT GGTGCAAAAT
CAGCTCAGCA CACGCGACAT AAAAGACAAG AGAGTACTGA CGGCAATGAG AGAGGTTCCC
AGACATCTCT TTGTCCCGGA CCTACTGGTT TTCAAAGCCT ATACCGACTC TCCCCTGCCG
ATAGGTGAAG GACAGACCAT TTCACAACCC TATATTGTTG CCCTGATGAC GGAGCTACTC
GAACTCACCG GCAGTGAAAG AGTGCTAGAG ATTGGAACCG GCTCAGGATA CCAGGCGGCG
GTGCTTTCCC AGGTCGCAAA AGAGGTGTTC ACCATTGAGA TCAAGGAGAA ACTCTGCACT
AAGGCCGGCA AACTTCTGGA CTCTCTGGGT TATACCAATA TTCAGGCCCG CTGCGGTGAC
GGCTACTTCG GCTGGAACAA GGAGGCGCCC TTCGATGCGA TTATGATCAC CGCCGCCGTG
GATCACGTCC CTCCGCCCCT TCTGGCGCAG CTCAAAGACG GAGGACGGCT GGTGCTTCCC
CTGGGAAATC CCTTCAGCTA TCAGAACCTG GTGCTGGTCA CCAGAAAGGG GGATGACTAT
AGGGTTTGGC AGATCTCCGG TGTTCTCTTT GTTCCCATGA CCGGACATGC ATTGAAGGAC
TCCGGGGAAA AGTAA
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| Protein sequence | MGKLLFLFIT LILFEQQSLA ALPTGDSEKY LRARESMVQN QLSTRDIKDK RVLTAMREVP
RHLFVPDLLV FKAYTDSPLP IGEGQTISQP YIVALMTELL ELTGSERVLE IGTGSGYQAA
VLSQVAKEVF TIEIKEKLCT KAGKLLDSLG YTNIQARCGD GYFGWNKEAP FDAIMITAAV
DHVPPPLLAQ LKDGGRLVLP LGNPFSYQNL VLVTRKGDDY RVWQISGVLF VPMTGHALKD
SGEK
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