| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2772 |
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| Symbol | |
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| ID | 5612615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3341698 |
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| End bp | 3343692 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933691 |
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| Product | putative 5'-nucleotidase |
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| Protein accession | YP_001474507 |
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| Protein GI | 157375907 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000553351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00604315 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTAC AGAAAACGAT ATTAGCTGTT GCTTTACTTA CTGCATTATC TGCGTGTTCG
AGTGACGATG ATAATAATGC GGCGTTTAGC CTCACTATTG CACATGTCAA CGATACTCAC
TCCAACTTCG ATCCGGTCAA ATCCAGCTTT TCCATGGGAG AAGAGGGCGA CGTTGTATTT
AACGAGTTTG GTGGCTACCC AAGAGTGCTC GAGGCAGCCA ACGACATAAA GGAAGATGCT
GCAGAAGCTA AGGAACCCTT GCTATTCCTG CACGGTGGTG ACGCTTGGCA GGGAACCGCT
TATTTCAAAC TAAATGACGG TATGGCCAAT GCCGATCTGC TATCACAGAT GGGCATAGAT
GCGATGGCTC TGGGTAACCA TGAGTTCGAT CTGGACACCA CTAAGCTGGC TTCATTTATC
GATGCGGTAA ACTTCCCGCT GCTCGCCAAT AACATGAATG CAGACAACGA TCCTGCACTC
AGTGGCTTGT CTAACCTATT ACCCTATCAG CTGTTCGCAT TTAACGGTGC CGTAAAACGT
AAGATCGCTA CGATTAGCGA TGCAACGGCG AGTGAGCAAG TGGTTGCCGT CGTCGGTGTA
GTACTCGAAG ATATGCCTAC GATTGCAACA GGTACCGGTG AGGCGACATT CTCAAGTGAG
ATTGAAACCA CTCAAAAGAC GGTCGATCAG TTAAAAGAGA AAGGGGTTAA CAAGGTTATC
GTCTTGTCCC ATATCGGCAA TGCCCGAGAT GTTGAGCTGG CGGCCGGTAC AACGGGTATC
GATGTGATCG TTGGTGGTCA CTCACATACC TTGCTGGGGG ATTTTACCGA GCTTGGACAT
GGTGATAATG GTCAGTATGC TCAGCTTGTC ACTCAAAAAG ATACAGTGGG TAAGACCTGT
ATCGTTCAGG CCGGACAATA CGCACAAGCC ATAGGTCAGG CGAGTGTAAG CTTCGATGAT
AAGGGTGAAC TCCTGACATG TAACGGGCAG AATACGCTGC TCTCTAATGA AACCTATTAC
AGCGATGCCA TGCGTGAGCC TGGTAGCCTG CTTACCGGAG ATGCCCATCA GAAGGTTGAG
AGCTTCATCG ACTCCAGCAT TCAGATCGAT GATGTAGACG AAGATGTGGC TCTTCGAGCG
CATATTGACG CGACCTATAA GCCGGCGGTT GAAGAGGCTT ATGGTGAAGT GGTTGCTACT
GTGAGTGAAG ATATCATTCA TGAGCGCCGC CCGGGCGATA AGGGCACCGA CATGCATGGC
TCTGATGTCG CACCGCTTAT CGGTGAAGGC ATGGTTTACT GGGCAAACCA GGAAGGCGTT
AAGTCGGTCA CCGGTAAGAC GGTTCAAATT GGCCTTGTCG GCGCCGGTGG TGTCAGAACC
AATATCGATG CCGGTGAGTT CAGAGAAGGT AATGCAAGTC TTGAGATGTT ACCGTTTTCT
AACTACCTTT CTGTCTTGAC CATTAACGGT GTGGTGCTGA AAGATCTGTT AACCACGACC
ATAGATGCGA CACTGCCCGA AGGCAGCCAT GCCGGTAAAT TCCCTTATGT GGGCGGCATG
CGTTATACCT TCACCGAAGA TGTGAAACAG CAAAGTGGCC ACATCAGTCA GCTTGAGTTA
AATACCGGCA CCGAAGTCGA GCCTAGCTGG GAGGTGATTC AGGACTCGGG TGAATATGTC
GTTATCGTTA ATAACTACAA TGCCAGCGGT AACGACGGCT GGAATGCCTT GGGTGAGGCA
CAGCTTAAGT CAACCGATCG TGTCGACATA GTGATAAGTG GCGATAACTA CAAGTCTTAT
GCGGTCGATC ATCTGACCTT CGATGAGGCC AGCGGCAAAT TCAGTGTCGT CTATGAGGGC
GCTGAGCCGA GCTGTGATGA TGGCGGAGCA GATATCTGTA ATACCGATGC ACGCTCTTTC
ATCGATTATG CCGATCATAA GAAAGTGTTA GAGGCGCTTC CATTCGAGTC GACGACTGTG
ATCTACAAAG ACTAA
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| Protein sequence | MKLQKTILAV ALLTALSACS SDDDNNAAFS LTIAHVNDTH SNFDPVKSSF SMGEEGDVVF
NEFGGYPRVL EAANDIKEDA AEAKEPLLFL HGGDAWQGTA YFKLNDGMAN ADLLSQMGID
AMALGNHEFD LDTTKLASFI DAVNFPLLAN NMNADNDPAL SGLSNLLPYQ LFAFNGAVKR
KIATISDATA SEQVVAVVGV VLEDMPTIAT GTGEATFSSE IETTQKTVDQ LKEKGVNKVI
VLSHIGNARD VELAAGTTGI DVIVGGHSHT LLGDFTELGH GDNGQYAQLV TQKDTVGKTC
IVQAGQYAQA IGQASVSFDD KGELLTCNGQ NTLLSNETYY SDAMREPGSL LTGDAHQKVE
SFIDSSIQID DVDEDVALRA HIDATYKPAV EEAYGEVVAT VSEDIIHERR PGDKGTDMHG
SDVAPLIGEG MVYWANQEGV KSVTGKTVQI GLVGAGGVRT NIDAGEFREG NASLEMLPFS
NYLSVLTING VVLKDLLTTT IDATLPEGSH AGKFPYVGGM RYTFTEDVKQ QSGHISQLEL
NTGTEVEPSW EVIQDSGEYV VIVNNYNASG NDGWNALGEA QLKSTDRVDI VISGDNYKSY
AVDHLTFDEA SGKFSVVYEG AEPSCDDGGA DICNTDARSF IDYADHKKVL EALPFESTTV
IYKD
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