| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2762 |
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| Symbol | |
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| ID | 5612475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3329135 |
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| End bp | 3330955 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933681 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_001474497 |
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| Protein GI | 157375897 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG0631] Serine/threonine protein phosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.757983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.303991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAT CGGTACCAGT AAAAGCCTCC TTATATGACG CTGCCTTGCC ACTTAATGGA
GCATTATCTA TCGCAGCGGG TCAATATTCA TGTCGAGGCG TGAAGCCGAG AAATGAAGAT
GCCATCGGGA TCCGTATTCC CGATGGTTTG ATGCTAACCA CCAAAGGCGC CGTGACGGTT
ATCTGTGATG GTGTGAGTGC TGCAGAGGCC GCTGAGCAAG CCAGCTCGAT CAGTGTGAGT
AACTTTATCA CCGATTACTA TTCCACCCCC GACAGCTGGA GTGTAAAAAA ATCCAGTTCA
CAGGTGATCA CCGCATTGAA TCGCTGGTTA TTCGGTTTGG GACAAGATTA TCGAGAGGCG
CACCGGGGCT ATGTCTGCAC CTTTACCTCG CTCATCTTCA AGTCTTGCAC CGTGCACCTG
TTACATGTGG GAGATTCGAG AGCCTATCGC TTTCGAGCGG GAAAGTTTGA GAGATTGAGT
CGCGATCACG TCACCGTGCT CGGCTCTGAT AAGCGCTATT TGGCAAGGGC GTTGGGTTTA
GATGTGAAAC TCGATGTTGA TTATAGAAAA CTGGATATGA AGGTGGGCGA TCTCTATTTG
CTGACCACAG ATGGTATTCA TGATGTGGTC AATGATATGG AGATCAGATC CCGGATAACG
GCTTTTAATC GACAATGGCA ACGAGTGAGT GAGTCAGTTG CCCCTGCGGA CTCGAGTCAC
TTCGATGAGT TTTGTCGGCA ACTTAGTCAT GATGCGGTCA CACTTGGCAG CACGGATAAT
GTCAGCTGTC AGCTGCTCTC AATTGAACGC TTGCCGACTC AAAACATCGA TGATCTCTAT
CAGTACCTCT CAGCATTGCC TTTTCCACCG CCATTGAAAG AGGGGATGAA GTTAGACGGC
TACCTTATCG AGAAAATACT GCATCAGAGC CAGCGCAGTC AGGTCTATCT GGTGACTAAC
GAGCAGGGTG AATGGCGTTG TATCAAAACC CCTTCGGTGA ATTACTCAGA TGACGCCGCA
TACATAGAGC GTTTCATGCT GGAAAGTTGG ATTGGACATA GGATCAATAG CCCCAACGTG
GTCAAATTAC TCGATAGGGA CAGGCCGAAG TCTTCGCTCT ACTATGTGAC GGAATACCTT
AAAGGTATGC CATTGAGCCT CTGGGTTGAC CGCAACCCTA ATCCATCGGT ACAAGAGGTG
TTGGTGTTAT TAAAGCAGAT AGAGGCTGGT GTCAGGGCAT TTCATCGCAA GGAGACGATA
CATCAAGACC TTAAACCGGA TAACATCTTA TTGACCTATG AAGGCCAGAT TAAAGTTATC
GATTTTGGTT CCTGCCATAT CAAGGGGATT GCCGAGATAT CCACCCCATT GCAACGAGAT
ATCATTCTTG GGACGGCCGA TTACTCTGCA CCGGAAAGTG TTTTGGGTTA CAGAGTTACC
AATAGTGCCG ATCTTTTCTC TTTGGCGGTG ATAGCCTTTG AGATGTTAAC AGGACAGCTG
CCATTCAAAG GAAAATTAGC TCAGTGTCGC AGCAAGCGTG ATTACCAAAA ATTACGTTAC
ATTCCCTGTT ATGAGCTCAA CCCTATGATC CCGCTGTGGA TGGATCCTGT GATAAAGCAA
GCCTTGAGTA TCGACCCCGA CCAGAGACAA GGTGATACCA GTGAATTTTT ATATGAGCTT
AGTCAGCCCA TCAATTCGAT GAGTAAGAGG GCGGCTAAAT TTGATCTGTC TTTGTCTCTG
CTCGATAGAA ATCCGCTTCG TTTCTGGCAA GGGTTAACGG TCTTTTTTGG TTTGACCAGC
TTACTGCTGT TATTAATATA A
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| Protein sequence | MTASVPVKAS LYDAALPLNG ALSIAAGQYS CRGVKPRNED AIGIRIPDGL MLTTKGAVTV
ICDGVSAAEA AEQASSISVS NFITDYYSTP DSWSVKKSSS QVITALNRWL FGLGQDYREA
HRGYVCTFTS LIFKSCTVHL LHVGDSRAYR FRAGKFERLS RDHVTVLGSD KRYLARALGL
DVKLDVDYRK LDMKVGDLYL LTTDGIHDVV NDMEIRSRIT AFNRQWQRVS ESVAPADSSH
FDEFCRQLSH DAVTLGSTDN VSCQLLSIER LPTQNIDDLY QYLSALPFPP PLKEGMKLDG
YLIEKILHQS QRSQVYLVTN EQGEWRCIKT PSVNYSDDAA YIERFMLESW IGHRINSPNV
VKLLDRDRPK SSLYYVTEYL KGMPLSLWVD RNPNPSVQEV LVLLKQIEAG VRAFHRKETI
HQDLKPDNIL LTYEGQIKVI DFGSCHIKGI AEISTPLQRD IILGTADYSA PESVLGYRVT
NSADLFSLAV IAFEMLTGQL PFKGKLAQCR SKRDYQKLRY IPCYELNPMI PLWMDPVIKQ
ALSIDPDQRQ GDTSEFLYEL SQPINSMSKR AAKFDLSLSL LDRNPLRFWQ GLTVFFGLTS
LLLLLI
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