| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2759 |
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| Symbol | |
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| ID | 5612008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3326072 |
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| End bp | 3326707 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933678 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001474494 |
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| Protein GI | 157375894 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.550861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.145492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCAAAG TTACCCATTG GGTTGTCGTT TCCCGTTCTC AACTTTTATG TGACCTACTC
GAAACCCGCT GGCCCCAGGA ATTTTTAATC AAATTGTATA GTGTCAGGCC CGAGTCGCTC
GAGTGTCAGT TGAGAGAGAC GCAATCATCC TTAGTCATTT TCGACCTTGC TTCGGTAGAT
GTGCAAGTCG CTTATCAACT GCAGCGACAT ATCGAACGTG AACACGCAGG ATTAAAAGTC
GTTTTTATTC ATTTCCCGAA ACAGGTCGAT ATTAAATTTT TAATTAACCC CTCGGTGACG
GCGGGTGTTT TTTATAATGA TCTCTCTCTC GAGGTTATTG GCAAGGAGTT AAACAATATC
CTCAGGGGCA GGAGCTATAT TCCTGCTGAG CTCAGCGTTG GCAGCAGTGA CGAAGAGTTC
AATCATGAAG AGAGTGAAAG TTTGACGATC CGAGAGCGAG AAGTGCTACA GGCGTTGCTC
TCGGGCAGTA CCAATGTGGA TATTGCCAAT CAACTCTTTG TTAGTGAAAG CACAATTAAG
ACTCATCTGT ATCGAGCATT TAGAAAAATT GGTGTGTCCA GTAGGGGACA AGCTATTGCC
TGGGCTCAGA CCCACCTCCA TGAGGTTCAT GCTTGA
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| Protein sequence | MFKVTHWVVV SRSQLLCDLL ETRWPQEFLI KLYSVRPESL ECQLRETQSS LVIFDLASVD
VQVAYQLQRH IEREHAGLKV VFIHFPKQVD IKFLINPSVT AGVFYNDLSL EVIGKELNNI
LRGRSYIPAE LSVGSSDEEF NHEESESLTI REREVLQALL SGSTNVDIAN QLFVSESTIK
THLYRAFRKI GVSSRGQAIA WAQTHLHEVH A
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