| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2722 |
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| Symbol | |
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| ID | 5611206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3286589 |
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| End bp | 3287725 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933641 |
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| Product | putative intracellular protease/amidase-like protein |
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| Protein accession | YP_001474457 |
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| Protein GI | 157375857 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.268961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCC TATTAAAACG AACCAAACAA CTGACAATTA AGCTGGCGAT GTTTATCACA
TTAACCGCTA TATCCATACA GCCTGGTGTT GCCGCCGAGA CTAAGAAAAT TGTGATGGTG
ATAAGTGGCT ATGGACAGCA GCAAGGTGAA CCAAAACCGG GTTATGAATT TGATGAGTTT
GCCAAAGCCT ATAGGGTATT TAGGGACAAT GGCATTGCGG TTGATGTGGC AAGCCCCCAA
GGCGGCAAAG TTGTTGCCGA CAAATATGAC CCAGGCAAAC CTTATAATGC CAAAGTGTTA
GCGGATGCTG AAGCGATGGC AATGCTGAAC AACACATTAG CAACCACAGC ACTTAACGCG
CAAAATTACG ATGCAATATT CATTGTTGGT GGTAAAGGCG CCATGTTTGA CTTACCTAAA
GATGAAGCAT TAAAAACAGC CATTGCTAAC ATCTATCAAC AAAAAGGCAC TGTAGCGGCA
GTGTGCCACG GGCCAGCGGC GTTAGTTGAT GTAAAGTTAA GTGACGGTAG CTACCTGGTT
GCCAATAAGG CGGTTAATAG TTTTACCAAC CAAGAAGAGC AATTATTTGG CAAAAAATGG
TTAAGCAAGT TCGAATTCAT GTTGGAAGAT AAACTCGTTG AACGCGGCGC TAAATTTCAA
TCGAGTGATA TGATGTTAAG CCATGTTGCG ATTGATGACC GCCTAATCAC AGGGCAAAAC
CCGGTATCTA CTGTTGGTGT CGCAACAGCC TTGGTAACAA GCCTGGGATT AACCCCGGTT
GATGCTGAAC AATATAGCGA AGATAAAACC ATGACGGTCA TCGCTAAGTT TCTGTCAGGA
GAGACTGAAG CGATTAATGA ACTGGCGAGT AAACCCGAGC TGTATCAACT ACCACTCGTT
GGCATGTATG GTTTCTATTA TCAAAAGTCA TCACAAACGG ATCAGCAATT TGAACATGCA
TTAACGTTAA TGATAGTTGC GCAAAAAACA ATTAATAATC CGAAATTAGA TATGCAAATC
GCTAAGACAC AGCATAAATT GGGCAAGGTT GATCAAGCTA AAGCAACGCT CAATCAACTA
CTAATAACTA AACCTGATTT CAAACCCGCG TTAGACATGT TACAAACAGC ATTCTAA
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| Protein sequence | MKALLKRTKQ LTIKLAMFIT LTAISIQPGV AAETKKIVMV ISGYGQQQGE PKPGYEFDEF
AKAYRVFRDN GIAVDVASPQ GGKVVADKYD PGKPYNAKVL ADAEAMAMLN NTLATTALNA
QNYDAIFIVG GKGAMFDLPK DEALKTAIAN IYQQKGTVAA VCHGPAALVD VKLSDGSYLV
ANKAVNSFTN QEEQLFGKKW LSKFEFMLED KLVERGAKFQ SSDMMLSHVA IDDRLITGQN
PVSTVGVATA LVTSLGLTPV DAEQYSEDKT MTVIAKFLSG ETEAINELAS KPELYQLPLV
GMYGFYYQKS SQTDQQFEHA LTLMIVAQKT INNPKLDMQI AKTQHKLGKV DQAKATLNQL
LITKPDFKPA LDMLQTAF
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