| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2607 |
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| Symbol | |
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| ID | 5610935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3159010 |
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| End bp | 3159930 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640933526 |
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| Product | agmatinase |
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| Protein accession | YP_001474342 |
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| Protein GI | 157375742 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.564715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.403684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACAA TTGCAGATAA ACCTGATTAC TCTCTCTATT CCAATGCATT TGGTTATCTA
AGACAACCTT TAGATTTTAA CCCTATTCAA AGCGATGCCG ATGTTGTGAT CTTGGGTCTG
CCTTTTGATA TGGCCACCAC GGGGCGTTCT GGCGGCCGCA TGGGACCTGG AGCGATTCGT
CAAGCCTCGA TCAATCTTGC CTGGGAAGAG ACGCGTTGGC CTTGGGACTT TAAGCTTAGT
GAGCGTTTGA AAGTTGTCGA TGCCGGCGAT CTGGTTTATG ACTGTGGTGA TGCAGCCGAC
TTTACCCAGC GTGTCGAAGA CTTCGCAACG GCAATCCTTG ATGCCGATAA AGCCCTGTTA
AGTTTTGGTG GCGATCACTT CGTGACACTG CCATTGTTAA GGGCGCACTA TAAAAAACAT
GGTAAAATGG CACTACTTCA TTTCGATGCG CATACCGATA CCTATAGTCA GGGGAGCAAG
TACGACCATG GTACTATGTT CTACCATGCG CCAAAGGAAG GGATTATCGC ACCGGAAAAT
TCACTACAAA TCGGTATTCG AACCGAATAC AATCATGACG ACCACCAGTT CCAGGTTATC
GATGCGGCAA ATGCAAACGA CATGACAGCC CAGGAGATCG TGGCGCAGAT CAAGCAGCGG
GTAGGGGATA TGCCGCTCTA CATTACTTTC GATATTGATT GCTTAGATCC TGCTTATGCC
CCGGGTACCG GCACGCCCGT GTGTGGTGGC TTGACCAGTG ACAAGGCGAT GAAAATCATC
CGTGGCCTGC GGGGCATGAA CGTCGTCGGA ATGGATGTCG TTGAAGTTGC CCCAGCTTAT
GACAGCGCAG AAATAACAGC GTTAGCCGGA GCAACGCTGG GTCTTGAGAT GTTGCATGTG
TGGTGTGATT CGAACAAGTA A
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| Protein sequence | MTTIADKPDY SLYSNAFGYL RQPLDFNPIQ SDADVVILGL PFDMATTGRS GGRMGPGAIR
QASINLAWEE TRWPWDFKLS ERLKVVDAGD LVYDCGDAAD FTQRVEDFAT AILDADKALL
SFGGDHFVTL PLLRAHYKKH GKMALLHFDA HTDTYSQGSK YDHGTMFYHA PKEGIIAPEN
SLQIGIRTEY NHDDHQFQVI DAANANDMTA QEIVAQIKQR VGDMPLYITF DIDCLDPAYA
PGTGTPVCGG LTSDKAMKII RGLRGMNVVG MDVVEVAPAY DSAEITALAG ATLGLEMLHV
WCDSNK
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