| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2592 |
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| Symbol | |
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| ID | 5610762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3143075 |
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| End bp | 3144013 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640933511 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001474327 |
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| Protein GI | 157375727 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTGA AAACCACACT GGATCAGTGG CTAACCCTGT ATGAAATTGA CCGAGCTGGC
AGTATTCAGG CCGCTGCGAC AGCATTGAAC AAGAGCCACA CCACGCTAAT CTATTCGGTC
AAAAAGCTTG AAGCGCAGTT AGGTGTCTCT CTTGTGGAGA TAAAGGGTCG CCGTGCGGTA
CTGAGTGACG ATGGAAAGGC GCTCCTTCGC CGGGCAGATT CGATGTTAGA GCAGGCGAGG
GAGCTCGAAG AGATAAGTAC GCAACTTGCT AAAGGGATCG AGTCGGAGAT CACCATCGCC
ATCGATCACC TCTGCGATCG CAGCTGGTTA TATCAACCTA TGGCGGATTT CCTGGCACAA
AACAGCAGTA CCTCCATTCA AGTGGTCGAG ACCTCACTGT CTAAAACAAC ACAGATGGTG
ACCGATGAAC TGGCCGACAT CTCTATTGTT ACCCTGCCTG TCACTAACTA TCCATGTGAG
GCCTTCGGTA TTGTGACTAT GCTCCCCGTG GTGGCCAAAA GCCATCCGCT GGCAGCCAAG
CAGCCCCTCT GTTCGGCGGA CTTCACCACC ACAAGCCAAA TCGTTGTCAG AGATTTAGGC
GGCACACTTA AGCAAGTTGT AAAGCAAGAG GCAAAACAGG GTGCGCAACA AGAGGCAAAA
CAAGATGTGG GTTGGCTCAG GTCCCGACAG CGTATTACGG TGGATAATTT CGACCACGCC
TGGCAGGCCG TAGAGCAGGG CGCTGGTTTT TGCCGCCTGC CGGAGCACCT CTTAAGCAGC
AGAAGCATGG ATAATGTCGT TATCTTAAAA GTAGATAATG CCCAGCGCTA TCAGGTGCCT
ATGCACTTAA CCTTGCCGAA AGGCGCCAAA ACCGGCCCCG CCGCAAAGTG TCTGTACCGG
CTGTTGATGG AGAGTAAAAA GCTTAGGTCG AAGGTGTAA
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| Protein sequence | MRLKTTLDQW LTLYEIDRAG SIQAAATALN KSHTTLIYSV KKLEAQLGVS LVEIKGRRAV
LSDDGKALLR RADSMLEQAR ELEEISTQLA KGIESEITIA IDHLCDRSWL YQPMADFLAQ
NSSTSIQVVE TSLSKTTQMV TDELADISIV TLPVTNYPCE AFGIVTMLPV VAKSHPLAAK
QPLCSADFTT TSQIVVRDLG GTLKQVVKQE AKQGAQQEAK QDVGWLRSRQ RITVDNFDHA
WQAVEQGAGF CRLPEHLLSS RSMDNVVILK VDNAQRYQVP MHLTLPKGAK TGPAAKCLYR
LLMESKKLRS KV
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