| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2580 |
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| Symbol | |
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| ID | 5609790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3130913 |
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| End bp | 3131173 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640933499 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474315 |
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| Protein GI | 157375715 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGTATT TTGCATATGG TTCCAATATG TCACTTTTAA GATTACAACA ACGAGTACCA
AGTGCTGCAA GGCTTGGTGC TTTTGTTCTT AAAGAGCATA AATTATGTTT TCATAAAATT
GGTAAAGACG GCTCTGGAAA ATGCGACGCT TTTCGCACGA ACAAAATTGA TGATCTGGTC
ATAGGAGCTA TTTTTGAAAT CAATGAAGAT GAAAAAGAAG CTTTAGATAG AGCAGAAGGC
TTAGGCTCTG GTTACAGTTA A
|
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| Protein sequence | MKYFAYGSNM SLLRLQQRVP SAARLGAFVL KEHKLCFHKI GKDGSGKCDA FRTNKIDDLV
IGAIFEINED EKEALDRAEG LGSGYS
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