| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2577 |
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| Symbol | |
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| ID | 5610875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3127305 |
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| End bp | 3127823 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933496 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474312 |
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| Protein GI | 157375712 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGAG AACAAATAGC CGCTAGTCTT GAAGAGGCGT TCAGTAAATA TGGTTTCGCC
GAGCCGAGCG TTGCTCAGCT AAAGACAGCG TGTAACGTAA GCCTGCGAAC TCTATACAAA
TACTATCCAT CCAAGGAAGC GATGATAGTC GGTGCTCTGG AGTATCGTCA TCAAAGATAC
CTCACTTTTC TGCTTAACGA GTCGCCATCC AATGGTGTTG AGTCTGCTTT GTATATTTTT
AATAAACTTG AACAATGGAT GAAGGAATAT GCGCCACACG GTTGTCTGTC TATGAATGCT
ATTGCAGCCT TTCCCGACAA TCCACTTATC AATAAGGCAG TTAAAGAACA TAAAGAGGAA
GTTCGCCAGT TCTTAGGCCA GCAAAGCCAG AGAGAAGATC TTTCTACGGC TCTGTTTTTA
CTGCATGAAG GCGTATCAAG CGCATGGCCC GTACTGGGTA AAGAGGCGAT AACATCGGCT
CAAAAGGCGC TATTACAACT TTTAGAGGAA GATTCATGA
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| Protein sequence | MLREQIAASL EEAFSKYGFA EPSVAQLKTA CNVSLRTLYK YYPSKEAMIV GALEYRHQRY
LTFLLNESPS NGVESALYIF NKLEQWMKEY APHGCLSMNA IAAFPDNPLI NKAVKEHKEE
VRQFLGQQSQ REDLSTALFL LHEGVSSAWP VLGKEAITSA QKALLQLLEE DS
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