| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2570 |
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| Symbol | |
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| ID | 5609680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3120588 |
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| End bp | 3121475 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640933489 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474305 |
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| Protein GI | 157375705 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAC AACCGAACAA TCTGTTGGGG TGGTTACTCG GCACGGGGGT GGCCCTTTTG
CTTTGTGTCA TCAGTGTCGC AGTATCGTCC TATCATGGCG AGCAGGGCCG GGAAACCGTG
TTGCTCTTTG ATAGCTTACC GTATCTGCCC ATATTTGTTT TTGCCGTTAC CCTGTTGACC
GCATCAAAGT TGCGGCGCCC GGGCGATCGC ATCGAAGGTG ACCGGGTCCT GCGTCATGAT
GGTATCGCTC GATTAACCCA TTGGACTACC GCCTTTGGTT GCCTGTTGTT GCTGGCTACG
GGGATTGCTC TGGGCTTCCT GTTTATTCCA CGTTTTGTGG TCGATGCAAC TGCTACGGCG
ATCATGTTTA ACCTGCATTT TGTCGGGGTT TTGTTTTTCG TCTTTGGTTG CGGCCTGTGG
GCCACCAATC AATTGGTTGA GCCCCGGCGC CTTGGCACAC ACCTACCGGA CGAATCGGTT
TGGGTGGAGT TGAAGAAGTC TGTGCTGCAT TACACCCATA TGCTGGGTAT GACCAAAATT
CATGTAGAAG CCCCGAAATA TCACCATTCA GGACGCCTCG CCGGGTTAGT GATTATTGCC
TCGTCATCTG TGGTTATCCT ATCCGGTTTC GGGAAGTTAC TGGCCCGCAG TGCGGACCTC
AATCCAGGCA TTGCGGAGCT GATCAACCTG AGCCACGGCT GGGCAGCATT GGCACTCTTG
CTGCTGATCC CCGTGCATGC GTTTCTGGGC GGAATAGCCC CCTGGGCCTG GAATACATTA
ACAGCCATGT TTACCGGCTA TGTAAGTCGT GATTATGCCC AAAAAGAGCA TGCAATTTGG
TTCCGGGAAT TAGAAGAAAA GCAGCGTCAT CAGGAGTCGC AACAATGA
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| Protein sequence | MRKQPNNLLG WLLGTGVALL LCVISVAVSS YHGEQGRETV LLFDSLPYLP IFVFAVTLLT
ASKLRRPGDR IEGDRVLRHD GIARLTHWTT AFGCLLLLAT GIALGFLFIP RFVVDATATA
IMFNLHFVGV LFFVFGCGLW ATNQLVEPRR LGTHLPDESV WVELKKSVLH YTHMLGMTKI
HVEAPKYHHS GRLAGLVIIA SSSVVILSGF GKLLARSADL NPGIAELINL SHGWAALALL
LLIPVHAFLG GIAPWAWNTL TAMFTGYVSR DYAQKEHAIW FRELEEKQRH QESQQ
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