| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2568 |
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| Symbol | |
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| ID | 5609805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3117755 |
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| End bp | 3119896 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640933487 |
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| Product | aldehyde ferredoxin oxidoreductase |
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| Protein accession | YP_001474303 |
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| Protein GI | 157375703 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2414] Aldehyde:ferredoxin oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT TAAAAGGTTT TGCAGGCAAA ATCCTGCACA TTGATTTAAA TAATCTGACA
CATCATATTT TGCCGACGGA GGATTATTAT GAATGGGGCG GTGGCCACGG ATTTGGCGCT
AAATTGTTTT GGGATCTGTG TGAAGATATC GAAGCCGTGA CCGATGGTCG CGACCCGCGT
AACGTCATCA CTATCGCGGG TTCACCCTTT TCAGGGACGA ATGTTCCCTC TGCCGGTGGC
CGTTGTGAAG TGACGAACAT GTCGGTGGGT TTGATCCCCC GTAACCGGTT CACCCGTTCC
AACTTTGGCG GTCATTTTTC CTCTATGATG AAGCATGCAG GCTGGGATGC GGTAACCGTC
ACTGGTAAAG CACCCTATCC CGTCTATATT GATGTGCGCA ATGACCATGT GATGATCCGG
GAAGCCAGCC ATTTATGGGG TAAAGATACC CATGAAACCC AGCAAATTAT TCAGGAGGAT
GTTGCCAGTG TCGAGGTGAC CTCCGGCTGG AGTGGCCAAT TAGACGGCAA CAGCTTTGGC
CGTACTACTC AAAAGGCCTC GGTGTTAACT GTAGGCCAGG CTGGTGAAAA TCAATCGGCA
CTAGGCTGCC TGATCCATGG CGCGGGTAAT GCGGCAGGTC AGGGCGGAAG CGGTGCGGTA
TTTGGCTCAA AAAACCTGAA GGCAATCAGC TTCATCGGCA CGGGGGCTGT AGAAATTGCC
GATCCTGAAG CCTTGATAAA AGCTCGTTTT ATAACCCGTG ACTTTTACGC TGCGGATGTT
GACAAATCAG CAGCATTTGC CTACCCCAGT TTGGGAGGGA AACCCGAAGC CGTCACTTTT
TCTACCATGC CAACAGGGCA CCGGGTGTCT TCATGCCATG GATGCGTTAA TGGCTGTAAA
CAACGTAACG CCATCGGCTA TGGCAATGAA GTCACCTGTC AAACCTCTCT TTGGTACCTT
GGGGCGGTAC GTTCCTATAA ATTTGGCGGG GATGCCAAGC TTAGTCTGTC CAACAGGGGG
TTAGAATTAA CCGAAGATAG CCTTTATGCC GGGGATTTGG CCAACAAACT GGGGATCAAC
ACTTATCCAA TTATGGGGCT CATACCATGG CTGCAAAAAA TGCATGCCAA AGGGGAGTTA
GGTTCAGGCA AAGAGATCCA TAGCGAACTA CCCTATGAGC TCTTGGGGAC CAGAGAATTT
GCCGAGCAGT TCTGTCAAGC CATTGCGACG GGGACCGATA TTGGCGCTCA TTTTATTGAT
GGTATAGTGC CTGGTATTGA ATCGTTAGGG CATGGCGCAG ATGTTGATAA TGGCACACTT
CACTACCCTT ACTATGGCAT GCCGGAACAC GGTTATGATC CTCGCGCAGA ACTGGAGTGG
GGCTATGCTA CGTTAATGAC CGATCGGGAC ATGAACGATC ACGGCTTAAA TTGGATCTAT
TGGACCGTTA ATCTTGCCAA ACTGGAAGGT ATTAATTTCC CGATCCCTGC TGAGACATTG
GTAACGCGGT TTGTTGAAAA AATGGCGCCG TATGTACAAC CAAATGAAGT CAGTGCCATG
GATTACGCCA GCCATAACAT GTACTCAGAG GTGTTAGCTC GCCAGGTTCA GTGGATAAAT
CACTATGGCC GCTTCTGGAA AAATTCTGCC CTGATGTGTG ACTTCCGCTG GCCGGACTGT
GTGAATACAC ATCGTGAGGA TCTCCGCGGT GCAACCGGCA ATGATGAGGT GGGTGAGCAA
GTCTGGTGGA ACGCGGTAAC CGGTGAAGGT ATCAGCTATG TTGACGGTAT CGAGCGTGGT
CGCCGGATCT TTAACTTAGA TAATGCAATT TGGGTGCTGC AGGGGCGCCA CCGTGATGAT
GCCAAGTTTG CCGATTATAT CTATGACCAA AAGATGACCC ACAACAAGCT ACCCACCTAC
CTGTGGCCCG CCACAAACGA AGCCGGAGAG TGGGATTACC GTGAGATGCT GGGGCGTCAA
CATAGCCGCG AGGGCGTGGA GGAGTGGAAG AGCCACTATT ACCGTGCCGA AGGCTGGGAT
ATTGCTACAG GCTGGCCAAC TCGCTCACTG CTTGAGGGCA TGGGCATGAA AGATGTTGCC
GACCGATTGG AGCAAGTGGG TAAACTTGGC AGTGAGACGT AA
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| Protein sequence | MKKLKGFAGK ILHIDLNNLT HHILPTEDYY EWGGGHGFGA KLFWDLCEDI EAVTDGRDPR
NVITIAGSPF SGTNVPSAGG RCEVTNMSVG LIPRNRFTRS NFGGHFSSMM KHAGWDAVTV
TGKAPYPVYI DVRNDHVMIR EASHLWGKDT HETQQIIQED VASVEVTSGW SGQLDGNSFG
RTTQKASVLT VGQAGENQSA LGCLIHGAGN AAGQGGSGAV FGSKNLKAIS FIGTGAVEIA
DPEALIKARF ITRDFYAADV DKSAAFAYPS LGGKPEAVTF STMPTGHRVS SCHGCVNGCK
QRNAIGYGNE VTCQTSLWYL GAVRSYKFGG DAKLSLSNRG LELTEDSLYA GDLANKLGIN
TYPIMGLIPW LQKMHAKGEL GSGKEIHSEL PYELLGTREF AEQFCQAIAT GTDIGAHFID
GIVPGIESLG HGADVDNGTL HYPYYGMPEH GYDPRAELEW GYATLMTDRD MNDHGLNWIY
WTVNLAKLEG INFPIPAETL VTRFVEKMAP YVQPNEVSAM DYASHNMYSE VLARQVQWIN
HYGRFWKNSA LMCDFRWPDC VNTHREDLRG ATGNDEVGEQ VWWNAVTGEG ISYVDGIERG
RRIFNLDNAI WVLQGRHRDD AKFADYIYDQ KMTHNKLPTY LWPATNEAGE WDYREMLGRQ
HSREGVEEWK SHYYRAEGWD IATGWPTRSL LEGMGMKDVA DRLEQVGKLG SET
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