| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2488 |
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| Symbol | |
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| ID | 5610031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3025601 |
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| End bp | 3026242 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933409 |
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| Product | paraquat-inducible protein A |
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| Protein accession | YP_001474225 |
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| Protein GI | 157375625 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0028453 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.335201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAC TCAATAACAA GATGCAAGGC ATAACGCTGG GTCTAACCCC CTGTCCCTCT
TGCGGTAAAC TATCTGTTCA TTCAGATATT CACTGTAAGC GGTGTGGTAA AGCATTAGTA
TTGCGAGACT ATTCCAGTCT CCATAAAAGT TGGGCCCTGT TGATCACGGC AACCATTTTA
TTGTTTCCAG CCAATCTCTA CCCCATCACT ATGTTGGTCA ACAGAGGGCA GATCCGCCAC
GATACTATTT TCACAGGGAT AGTCCACTTG GTCGAGTCGG ATATGTTCCC TATCGCTGTC
ATTCTATTTA CTGCCAGCAT TCTGGTCCCT ATGCTGAAGA TCGTCGGGCT AACCGCATAT
TTGATCGCTA TCAGTTTCCG ACTGCCAATA TCTAAACAGA AATTGATGAT CGGATTTCAT
ATCATTGAAT GGATAGGACG TTGGTCGATG TTGGACCTTT TCGTTATATC AATAACCGCC
GCACTGGTTA ATATGGGCCA GTTGTTAGAT GCTAAACCCG CACCGGCAGC CACTGCTTTT
GCCTTGGTCA TATTACTGAC CCAATTAGCA GCAAAAGTGC TGGATACTCG TTTACTCTGG
GATCGATTGG AATCGAAAGA TGACGCAAAT GGAAACACCT AA
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| Protein sequence | MSELNNKMQG ITLGLTPCPS CGKLSVHSDI HCKRCGKALV LRDYSSLHKS WALLITATIL
LFPANLYPIT MLVNRGQIRH DTIFTGIVHL VESDMFPIAV ILFTASILVP MLKIVGLTAY
LIAISFRLPI SKQKLMIGFH IIEWIGRWSM LDLFVISITA ALVNMGQLLD AKPAPAATAF
ALVILLTQLA AKVLDTRLLW DRLESKDDAN GNT
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