| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2435 |
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| Symbol | |
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| ID | 5614153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2957400 |
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| End bp | 2958485 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933346 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474172 |
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| Protein GI | 157375572 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0011748 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAAATT TATTAACTAC TTGGTATAAA GAGCGATTTA GCGATCCTCA AGCGGTAACC
TTAGTTTTTA TATTGATGGG GATCGCCCTT GCAATTTACT TTGCTGGTGG CTTGTTGGCG
CCATTGTTGG TGGCATTAGT ATTGGCCTTT TTACTCGAGT GGCCCGTTGC ACAGATGATT
AAGGTTGGAA TGAACCGGAC GACTGCAGCC TCGGCGGTGT TAGTCCTGTT TATTGGCACT
ATGCTGCTGA TAACCTTCGG TCTTGTTCCC AGTATTTGGA AGCAGGGGCT AGCGTTGATC
ACGGATCTGC CAACCATGCT GGATAAGGGA CTTCATACGG CCCAGAGCTA TGTGAACCAG
TATCCCCAGT TTGTGAATCC CGATCAGCTC GATACTATGG TGGGTGAGCT CAAGAAGATG
CTCGATACTC AACATCTGCT CGATATTGGC AAGCAGATCA TTGGCTATTC GGCCTCCTTA
CTCGTATTGA TGGTGTACGC TATTCTGGTG CCTTTATTGG TCTTTTTCTT TCTTAAGGAT
AAAGACGAGC TGATAAAGGG CAGTAAGCGG TTTATTCCTA CTAACCGAGA ACTTGCCCGC
AAAGTTTGGT ATGAGATGCA TCAACAGATC TTTAATTATA TCCGGGGTAA GGTGATAGAG
ATCATTATTA TTGGCGGCGT GAGTTATGTT TTCTTTGCCA TCATGGATCT CAGGTATGCA
GCACTCCTGG GCGTACTGAC AGGATTATCA GTGCTTATTC CCTATGTAGG TGCGACGTTA
GTGACCTTAC CCATAGCACT CGTGGCATTT TTCCAGTGGG GGATAAGCCC TGAATTTGGA
TATCTGATGT TAGGTTACGG TATTATTCAA GCTCTGGATG GTAACTTACT GGTTCCAATC
CTCTTCTCTG ATGCGGTCGA TCTTCACCCT GTGTTTATTA TCGCCGCAGT ACTTATCTTC
GGTGGTTTAT GGGGAGTATG GGGAGTCTTC TTCGCGATAC CTTTGGCGTC GTTGGTGAAG
GCGGTATTAA ATGCCTGGCC AACACCAAAT TCTCAAGTCA ATGGCGTCGA ACCGAAAACC
GAGTAG
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| Protein sequence | MLNLLTTWYK ERFSDPQAVT LVFILMGIAL AIYFAGGLLA PLLVALVLAF LLEWPVAQMI
KVGMNRTTAA SAVLVLFIGT MLLITFGLVP SIWKQGLALI TDLPTMLDKG LHTAQSYVNQ
YPQFVNPDQL DTMVGELKKM LDTQHLLDIG KQIIGYSASL LVLMVYAILV PLLVFFFLKD
KDELIKGSKR FIPTNRELAR KVWYEMHQQI FNYIRGKVIE IIIIGGVSYV FFAIMDLRYA
ALLGVLTGLS VLIPYVGATL VTLPIALVAF FQWGISPEFG YLMLGYGIIQ ALDGNLLVPI
LFSDAVDLHP VFIIAAVLIF GGLWGVWGVF FAIPLASLVK AVLNAWPTPN SQVNGVEPKT
E
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