Gene Ssed_2403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2403 
Symbol 
ID5613009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2922811 
End bp2923179 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content42% 
IMG OID640933314 
Producthypothetical protein 
Protein accessionYP_001474140 
Protein GI157375540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.914674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.255888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAATTG AACACAGCGA ATTGATGGCT GAGTTAAGTT CACTCAACTG CAGAACAAAT 
TTCACCATTA AGAAAATCAC CGAATATATG CTGCCGGAGC TCAAAGAGCC TATCTACCTT
CACGGTGCCG ATAAAGATTG CCAACTGGTT ATCAGGCCTG CTTATGAAGT GTTCCTGGCC
GATCTTTCTG AACTCGAAGG AGTTAAACAC AAAGAGGGCT ATTTCCATAA TAATGAGATG
ACTCGATTTC CTAAACGTGT GCAGAAGAGC CTCAACGGCA TTCATTATGG TCTAGCATTT
AAGTTTTCCG ATAAAGAGGC GGTCAAACGA TTCATCAACA GACTTATCAG TATTATTAAT
GGCGGTTGA
 
Protein sequence
MAIEHSELMA ELSSLNCRTN FTIKKITEYM LPELKEPIYL HGADKDCQLV IRPAYEVFLA 
DLSELEGVKH KEGYFHNNEM TRFPKRVQKS LNGIHYGLAF KFSDKEAVKR FINRLISIIN
GG