| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2401 |
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| Symbol | |
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| ID | 5610377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2921147 |
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| End bp | 2922067 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933312 |
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| Product | zinc carboxypeptidase-related protein |
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| Protein accession | YP_001474138 |
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| Protein GI | 157375538 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.859636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.574501 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGT CAGACACCTA TTCGATCGGC ATACCGGGCA ATAAATGGGG TGAAGAGGAG
AAGAAGCAAT GGCTCCTTCA ACAAGAGGTC AAACGCTCCT ATCAAAAAGA GGTGGTAGCA
AAACTGGAGC CTTTGAAGGC TCGTTTCGAT GTCGAACAAT ATGGTGAGCT CTCCTATGAT
GCGGGCACAT ACCCGCTGTT TGTCGTCAGA AGTCGTCAAT GGGATAGCAA CAAGGCGACC
ATCTTGGTCA CCGGAGGCGT TCATGGTTAT GAAACCAGCG GTGTTCAGGG GGCCATTCGC
TTTCTTGAAA CCAAAGCTGA GTCTTATAGC GACCAGTTCA ACATTATTGT TGCGCCATGC
CTGAGCCCTT GGGGATATGA AACCATTAAC CGCTGGAATC CAAGCGCTGT AGACCCTAAT
CGCTCCTTCT ATGAAGATAG CCCATCACAA GAGTCGGCTG CATTGATGCG ATATATTGCC
ACATTCCAAC TTAAGCTCAC CGCACATATC GACCTTCATG AAACCACTGA CACCGACAAT
AGTGAGTTCA GGCCTGCGTT AGCTGCCCGA GATGGCAGTG TGCATAATAA TTGGAACATC
CCCGATGGCT TCTACCTTGT GGGTGATACT GAAAACCCGG TTGATGAATT TCAAAAAGCG
ATTATTGAGG TCGTCGCCCA GGTGACACAT ATCGCGCCGC CGGATGGGGA GGGTAAACTC
ATCGGCGTCC CGCTTTCTCA GGAGGGGGTG GTAAATTATG CGACTAAGGC ACTGGGTTTA
TGTATCGGTT TTAGTGACGC GGCCTTTACG ACGACAACCG AGGTTTATCC TGACAGCCCT
CTGGTCGACG ATGAAAACTG TATCCTTGCA CAAGTTGCAG CGATAACAGG CGGGTTAGAC
TTTATCTTAA AGAGAGGCTA A
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| Protein sequence | MKQSDTYSIG IPGNKWGEEE KKQWLLQQEV KRSYQKEVVA KLEPLKARFD VEQYGELSYD
AGTYPLFVVR SRQWDSNKAT ILVTGGVHGY ETSGVQGAIR FLETKAESYS DQFNIIVAPC
LSPWGYETIN RWNPSAVDPN RSFYEDSPSQ ESAALMRYIA TFQLKLTAHI DLHETTDTDN
SEFRPALAAR DGSVHNNWNI PDGFYLVGDT ENPVDEFQKA IIEVVAQVTH IAPPDGEGKL
IGVPLSQEGV VNYATKALGL CIGFSDAAFT TTTEVYPDSP LVDDENCILA QVAAITGGLD
FILKRG
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