| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2377 |
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| Symbol | |
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| ID | 5612182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2890472 |
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| End bp | 2891923 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933288 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474114 |
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| Protein GI | 157375514 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.316864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTG GTTCATCGTT ATTCATATCT ATTGCAGTGG TTATGATGTT TGTATGTGAT
CTGTCAGAGG CAAAGCCTTT GAGCGACGAA CATATGATGG CAGAAATGTA TGAGCGGGCT
GCCGATGAGC TTCTATGGTT TGATCGAAGA GGCGTCAGTT TAAATGGAAT GACCCTTATA
AGTTTACTCG ATGATCTTGG TGTCGAAGTC AATATCCCCC AACCTATCAA AACGACTAAA
CACCGTAAAC AAGCAGATAC TAGCTACACA AAAGCGTTAC TGACCGTTAT CGAAAGGATG
TCAGAGTCGA GTCATAAAGA GCTATCTGTG GAGCAAACTA AACTGCTACA AGCGATCAAG
CGTGACCGTT TATCTGAATT CATCGGTACT ATTTTGCCCT CTTTTGATGA GATTTACCGA
CTCAGAAACA TGATTGGTGA ATATAAGAAG AAGGTCAATG TAAAGTGGCC CACCATGAGT
CAATACGAGT TCAGGTTGGG ACAAAGTTCA AATGAGGTTA AACAGCTTAG GTGGATGCTC
ACACAGCTTG GCGATCTGGA GCATAGTGAA CTGACCCGTT ACCGAGAGGC CATTTATGAT
CCTATGGTCA TCGATGGAAT TAAGTCTTTT CAACTGCGCC ATGGCTTAAA CGTCAATGGC
AACCTCGATA AATACACTGT GGAAGCAATA AATGTCACTC CTTTGCAACG AGTTGAACAG
ATGCAACGTA ATCTCTGGCG CTGGATAACA CTATCCACCC CAAACGCTGA AAAGCTGGTT
TGGATAAACA TACCCGGCTA TCAATTGAGC ATCTTCGAAC AGGGAAGTGT AACGTTACAG
ATGAAAGTCA TTATTGGTAA ACCGAGTTCA CCAACACCAA TACTATCTAC TTATCTGACT
AAATTGACGA TTAACCCATC ATGGAGACCA CCAGCTAGCA TAATAAAAAG TGAGTTATTA
CCTCTTAACG CAGCAGAGCC TGGATATCTT AATCACAAAC AGTTTGAACT GCATGGTGTA
GGTTTGAACA AAAAACACGT TATTAAACTA GGTGACGTAG ACTCAAAGCA ACTCCCGACT
CTACTGAGGC AATATAGGTT GGTGCAAGCA CCGGGTGAAG ATAATGCCTT AGGTAAGATG
CGGTTTACTA TTGTTAACCG TCACTCGATA TATCTTCATG ACACGCCTGC AAAACAGTTG
TTTAAACGCA ATGTGAGGGC ATTGAGTCAT GGTTGTATTC GACTGGAAAA ACCTATCGCA
CTTTCCAGTT ATTTAGTGGA AACAGATGAG AGAGCAAGAG AGTTACAAAA GGCTGTAGGA
GGAAGTGGTA CTCGGCATTT TTCACTATCA AGCCCAATTC CGGTGTATAT CACTTATCAC
ACCTCTTGGG TCGATGCTGC AGGTAAGCTT CAAGTCAGAC CCGACATCTA TAACTTAGAT
ATGGAGATAT AA
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| Protein sequence | MRFGSSLFIS IAVVMMFVCD LSEAKPLSDE HMMAEMYERA ADELLWFDRR GVSLNGMTLI
SLLDDLGVEV NIPQPIKTTK HRKQADTSYT KALLTVIERM SESSHKELSV EQTKLLQAIK
RDRLSEFIGT ILPSFDEIYR LRNMIGEYKK KVNVKWPTMS QYEFRLGQSS NEVKQLRWML
TQLGDLEHSE LTRYREAIYD PMVIDGIKSF QLRHGLNVNG NLDKYTVEAI NVTPLQRVEQ
MQRNLWRWIT LSTPNAEKLV WINIPGYQLS IFEQGSVTLQ MKVIIGKPSS PTPILSTYLT
KLTINPSWRP PASIIKSELL PLNAAEPGYL NHKQFELHGV GLNKKHVIKL GDVDSKQLPT
LLRQYRLVQA PGEDNALGKM RFTIVNRHSI YLHDTPAKQL FKRNVRALSH GCIRLEKPIA
LSSYLVETDE RARELQKAVG GSGTRHFSLS SPIPVYITYH TSWVDAAGKL QVRPDIYNLD
MEI
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