| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2370 |
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| Symbol | |
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| ID | 5611890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2883124 |
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| End bp | 2884509 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933281 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474107 |
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| Protein GI | 157375507 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.217776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.232685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGAAA ATAGACAGTT TCTATTTCAT GGCATGGTGA ACAAGATGAA TATAAGACCA
TATCGCAAGC AAGGTGGAGC TATTCTGGTC ATGTTTACTA TTGGCCTGTT TTCATTGATC
GCTGTGGCTG CATTGGCACT CGATGGCGGA CACCTGTTAT TGAATAAGGG GCGTTTACAA
AATGCGGTCG ATGCGTCAGC CCTGTATGCT GCAAAAGAGC TACAGGATGG TGCGAGCTTG
TATGAAGCCA GAGAAGCGGC TACTACTTTG CTATTACAAA ACCTTCAATA TCAGGAAAAC
GGGGAACTCA ATAGCAGTAT CGATCTCTCT GCACCCGATT ACAACTCAAC TCAGGTAGCA
GCCAATCTGT TTATTGAGTT CTCAGAGTGG CCAGATCCTT TCTCGCCAAT ATTGGTGGAG
GGCAGTGAGT ATGTTCGGAT TAGAATTGAA AATGTCGGGT TAACAAATTT TCTCGCTCAA
ATCATGAATT TTGATAAATC GGTGAGAGCA TCTGCCATCG CGGGACGTAG TACGGACATC
GAGTGCCTCA ACAAAGCTGT TCCTATGATG GTGTGCGCAT TAAATGAAGA TGAAGATGAT
GATTTCGGTT TTAGTCCAGG AACTGTCCAT ATTATGAAGA TTGGCTCTAA CGCAGATAGT
CCTATTGGGC CTGGAAACTT TCAGCTTCTG CGGTTAGATG GTAATTCAGG TGGTGCCGAT
ATTCGTAGGG CCCTAGCAGG GGACTTTACT CTCGGTCTGT GTGTGGAGGA TGGAGATGAA
ATTCCAACTG AGCCGGGCAA CACTGTGGGA CCCGTGGTAC AGGGGTTAAA TACACGTTTT
GGAACCGATA AAGGTGGTGG AAATATTAGC GAGTTCAAGA GGGATTTCGA TGCCTGTCAG
GGTGATAGAG TTTTAGTTAA TGATGACGGT GATATCGTTG TCCAGCTTGA TGAGGCTGGG
GACCCTGTAC TCGATGCTGA TGGGCATACT ATTCCAGTCG ACAGTGCGGG AGCCATAATC
GATTATTATA CTCATGCCGA ATACAGCCCA GCTTCCCCGC TTCTTCCTCC AACCAGCTGT
CCTACAGGAT TTTCTGGTGA TATCTTGTCT AAACCCTCAT CAATAGCGTC GACTGGACGT
CGTGAATTCC CCATTGTTAT CGGTATTTGC GATGGTGTTA CCAATGGAGC TAACACGATC
ACGACTCTGG GCACCGGTTG CTTCTTTTTG ACACAAGAAG TGTCACAAAA GGGAAATGAG
GCCCATGTGA TTGGCGAGTT TCTCAGTGTC TGTTCCGGTT CAGGCAGTGC TTCACTCGAT
CCCACCTACG AGAGCAAAGT ATCAACAGTG GTCTTATACC GAGATCCCGA TAGTCCGGAC
TCATAG
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| Protein sequence | MWENRQFLFH GMVNKMNIRP YRKQGGAILV MFTIGLFSLI AVAALALDGG HLLLNKGRLQ
NAVDASALYA AKELQDGASL YEAREAATTL LLQNLQYQEN GELNSSIDLS APDYNSTQVA
ANLFIEFSEW PDPFSPILVE GSEYVRIRIE NVGLTNFLAQ IMNFDKSVRA SAIAGRSTDI
ECLNKAVPMM VCALNEDEDD DFGFSPGTVH IMKIGSNADS PIGPGNFQLL RLDGNSGGAD
IRRALAGDFT LGLCVEDGDE IPTEPGNTVG PVVQGLNTRF GTDKGGGNIS EFKRDFDACQ
GDRVLVNDDG DIVVQLDEAG DPVLDADGHT IPVDSAGAII DYYTHAEYSP ASPLLPPTSC
PTGFSGDILS KPSSIASTGR REFPIVIGIC DGVTNGANTI TTLGTGCFFL TQEVSQKGNE
AHVIGEFLSV CSGSGSASLD PTYESKVSTV VLYRDPDSPD S
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