| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2369 |
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| Symbol | |
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| ID | 5611889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2882617 |
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| End bp | 2883114 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933280 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474106 |
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| Protein GI | 157375506 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.266179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.186835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATGG TTAAGCAAAA GGGGGTCGCT GCAATCGAGT TTACTATCAT GTTGCCTGTG
TTATTGTTGA TGCTGTTCGC TACGGCAGAG ATTGGCCGGG CTATCTATCA GTATAGTCAC
CTTACGCGAA TGGTGCGTGA TGCGAGCCGT TACCTATCTG TTACGGCTAT ACCCGATACA
AGTGGATCAT TAGCCGCAAG TTTCGATGAT AATTGTGACC TGGGTGATGA TTGTAATTTA
GATTGTAAGA ATTGTATCTC CGAGACGAAA GACTTGCTTG TTTATGGCAA AGTCGGAGGA
ACGGTACCTT TACTCTATGG TTTGTCAACC AGCGATGTGA TCATTTCAGG TTCGCCTGCT
ACAAGCATCG TCACGGTCTC AGTCGATTAT AATTGGCACC CCTTATTCAG TGACCGAATT
TCAGGATTTG GAATTGGTGA TGGTATCGAT TTAAGTTTCA ACTTCAGCGT TAGTCATGCG
ATGCGAGCCG GTTTATGA
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| Protein sequence | MRMVKQKGVA AIEFTIMLPV LLLMLFATAE IGRAIYQYSH LTRMVRDASR YLSVTAIPDT
SGSLAASFDD NCDLGDDCNL DCKNCISETK DLLVYGKVGG TVPLLYGLST SDVIISGSPA
TSIVTVSVDY NWHPLFSDRI SGFGIGDGID LSFNFSVSHA MRAGL
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