| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2368 |
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| Symbol | |
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| ID | 5611034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2882162 |
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| End bp | 2882620 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933279 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474105 |
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| Protein GI | 157375505 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.274749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.12275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGATTTC AACGAGGAGT TTATGCCGTT GAGTTTGCCA TAGTCGCTGG TGTATTCCTG
ATGCTGCTAT TTGCCATAAT TGAAGTGGGT AGGTTGATGT ATACCTATAA TGTACTTCAT
GAAGCGTCCC GAAGAGCGGC AAGAATAGCT GTTGTGTGTC AGGTGACAGA TACGGATATT
AAAAATATGG GACTGTTTAA TGGTATTGAT TTAATTCCCA ATTTAACCCC TGCAAACCTG
ACTATCAGTT ATCTCGACAA CGAGGGCGAT GAGGCTACCG GTATGGCGAT TGTACTCGTT
CGTGCCGAGA TAGCTAACTA TCAACACGAG TTTTTAGTAC CGGGTCTTTA TCGAGTGATA
AATTCTCCCA CTTTTTCGAC TTATCTCCCC CGGGAAAGCC TAGGTGTATA CCATGTAGAG
GATGAAGATC CTGGTTCCGG GTATATTGAT TGCAATTAA
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| Protein sequence | MRFQRGVYAV EFAIVAGVFL MLLFAIIEVG RLMYTYNVLH EASRRAARIA VVCQVTDTDI
KNMGLFNGID LIPNLTPANL TISYLDNEGD EATGMAIVLV RAEIANYQHE FLVPGLYRVI
NSPTFSTYLP RESLGVYHVE DEDPGSGYID CN
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