| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2347 |
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| Symbol | |
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| ID | 5611326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2854158 |
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| End bp | 2854847 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933258 |
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| Product | UbiE/COQ5 methyltransferase |
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| Protein accession | YP_001474084 |
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| Protein GI | 157375484 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.193258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000472141 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTTCGTC GCCGTGCAAC TCAGGTACAA GATGCTTGTG TGCCTCAACA TAAGATAATT
GCGGTATACG ATAAACTTGC ACCCGTTTAT GATATCTGGG GCGCACTGAC AGAAACTAAG
GCCAGAAGCA GGGCACTCGA GTTGGCTAGC ATCGATGATG GTAGCGCTAT CCTGGAAGTC
GCGGTCGGGA CGGGTTTAAC TTTTGCAGAG CTTGTAAAAC AAAATCCCAC AGGAACAAAC
ATCGGCATCG ACATCTCGAC CGGTATGCTC GACAAGGCAA AGGCCAGACT CAAGAAGGTT
GAAAATGCGA CTTATCAGCT GGAAACAGGA AGTGCATTTA AACTCAATAT AGAGAGTCAT
AGTGTCGATA TTCTCATGAA TAATTACATG TTCGATCTGA TCGCCTTTAA AGAGATGCCT
GTTATTCTCA ATGAGTTTAA AAGGGTGTTG AAACACGATG GTCGACTGAT TTTAGTGAAT
ATGACTCAGG GAGAGTCTCG GTTCAGTCGA ATGTATGAGT TGATATACCA TCTATCGCCA
AAATTGATGG GAGGTTGTAG AGGCGTCACG TTAACCGATG AGCTCATAGC ATCGGGTTTT
AAGGTAGAGA CGCGGGAATA TATCCAGCAG ATGTTGTTCC CATCGGAGGT TATTCTTGCC
CGGCCCAATA ACCGAGCGCC TTTGGAGTAA
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| Protein sequence | MFRRRATQVQ DACVPQHKII AVYDKLAPVY DIWGALTETK ARSRALELAS IDDGSAILEV
AVGTGLTFAE LVKQNPTGTN IGIDISTGML DKAKARLKKV ENATYQLETG SAFKLNIESH
SVDILMNNYM FDLIAFKEMP VILNEFKRVL KHDGRLILVN MTQGESRFSR MYELIYHLSP
KLMGGCRGVT LTDELIASGF KVETREYIQQ MLFPSEVILA RPNNRAPLE
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