| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2331 |
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| Symbol | |
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| ID | 5614130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2829819 |
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| End bp | 2830298 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933242 |
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| Product | peptide methionine sulfoxide reductase |
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| Protein accession | YP_001474068 |
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| Protein GI | 157375468 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0225] Peptide methionine sulfoxide reductase |
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| TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000860264 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCCATAG CGACATTTGG TGCAGGTTGT TTTTGGGGTG TTGAGTACTT TTTCAATCAG
ATCCAGGGAG TGACAAAAAC CAGCTGCGGA TATATGGGTG GTCATGATTC CGCTAACAGC
TACACGGAGG TCAAATCCGG AGAGACGGGA CATGCTGAAG TCGTTCAGGT AGAGTTCGAT
GAAAACCAGG TGTCTTACGA ACAGGTGTTA GCCGTATTCT GGCAGAACCA TAATCCAACC
AGCTTAAATC GCCAGGGTGG AGACATCGGC TCACAATATC GTAGTGCCAT ATTCTTTCAC
TCTAAAGCGC AAAAAGCCGT GGCTGAACAA TCTAAATTGG ACTTAGCCCG TAGTGGAAAA
TGGGGAGAGA GGCAGATAGT GACGGAGATT GTTCCGGTAT TACAATTTAA CCGAGCCGAA
GAATACCATC AGAACTACCT GGAAAAAAAC AACTTACCCA GTTGTCACAT CTCTTACTAA
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| Protein sequence | MAIATFGAGC FWGVEYFFNQ IQGVTKTSCG YMGGHDSANS YTEVKSGETG HAEVVQVEFD
ENQVSYEQVL AVFWQNHNPT SLNRQGGDIG SQYRSAIFFH SKAQKAVAEQ SKLDLARSGK
WGERQIVTEI VPVLQFNRAE EYHQNYLEKN NLPSCHISY
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