| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2270 |
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| Symbol | |
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| ID | 5611779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2742765 |
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| End bp | 2744129 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933180 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474007 |
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| Protein GI | 157375407 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAA TTACCAAAGA TGAAACAGAT GGCTTGATTT TTATTGGTGA TCTTCACGGC
CAGTATCAAA AGCTTATCGA CTTGCTTGAG CAATTAGATT TTAATCTCGA TGACTCTAGC
TCAAATGCCG AATTCAGTAA GCTGGTTTTT ATGGGCGACC TTATCGACAA CAAGCCTGAA
AATGCCGTTC AACAAGTTGA GACTCTTGAA CTGGTTAAAT CACTGGTCGA CAGTGGACAC
GCCTATTGCC TGCTCGGAAA TCATGAGTTT AATGCCGTAT GCTGGGCAAG CGCTCATCCG
CTCACAGATG AACCACTGCG GACTCATTCT GTAAATAATT ACAAGCAACA TCAGGTCTTT
CTCGATACGG TGACTGAAAA TAGCCGACTA CATATGAAAT GGATTGAATG GTTTAAAACA
TTGCCTCTGT TCATCGATTT CGGCGATGTC AGAGCCGTTC ATGCGTGTTG GGATGATGTG
GCTATTCAGC GGGTATTACC CTATCTGGAC GGTGATCATG CATTGCAGCA CAATGTGTGG
TTTAAAGCCG CAGATAAAAA ACATGAACTC TATAGCTTGG TAGAAACTTT GCTAAAGGGC
CCCGAGATTG CCTTGCCTAA AGGTTATTCC TTTAAAGATA AGACGGGCAC TGAAAGACAC
CATATTCGTG TCAGATGGTG GATTATTAAT GCTATTACCT ACAAAGATAT TGCACAGGTA
CAGGCAAGTG CCGTTGAAAA TATTCCAAGT ATTGCACTGC CTGTCGCGTT TCTGAATAAA
CCACAAACGA TCCCTGTCGT TATCGGCCAT TACACCTTAA ACAATGAACC CGGACCACTC
AACGCTAAGG TTGCCTGTGT CGATTATAAT GCGGCCAGTG AAGATGGCGA TCTCATTGCC
TATTATTGGA GCCGTTATGA CGAGGCGTTT ACTGCTTGTG GGTTTTATTG CCATAGGGAT
CTGGATCTAC ATGAAAAATC CAGTTATGAG TTGATGAAGG ATGATTATGA AAAGGTAATA
GAATCCTTTA ATCATGGTGG TGAGTATTCT GCATTAGAGG AATCGTTTGC GGTAAAGGTT
GATAACATTC TTTTGCAAGA GTGGGACCCA ATTGGCGTTA ACGGCGTAGA AGAGTGCCGT
GATGAATATT ATTTTGCCAT CTATGACATC ACGCTGTTAG GCATATACGG AAGTATTGAG
CAGCTAAAAT CCCATCTGGA ATTTTTGGAG GTTCATTACA TTCTGAGTGA TAGAGAAGAT
GTTCGTGAGA GATGCGGTCG TGTAGCCCAT CTTATCAATA AGATGGCAGA ACAGACACGT
TCAAACACAA ATATCAATGT AATACCGATG CGTTATGGCT GCTAA
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| Protein sequence | MIKITKDETD GLIFIGDLHG QYQKLIDLLE QLDFNLDDSS SNAEFSKLVF MGDLIDNKPE
NAVQQVETLE LVKSLVDSGH AYCLLGNHEF NAVCWASAHP LTDEPLRTHS VNNYKQHQVF
LDTVTENSRL HMKWIEWFKT LPLFIDFGDV RAVHACWDDV AIQRVLPYLD GDHALQHNVW
FKAADKKHEL YSLVETLLKG PEIALPKGYS FKDKTGTERH HIRVRWWIIN AITYKDIAQV
QASAVENIPS IALPVAFLNK PQTIPVVIGH YTLNNEPGPL NAKVACVDYN AASEDGDLIA
YYWSRYDEAF TACGFYCHRD LDLHEKSSYE LMKDDYEKVI ESFNHGGEYS ALEESFAVKV
DNILLQEWDP IGVNGVEECR DEYYFAIYDI TLLGIYGSIE QLKSHLEFLE VHYILSDRED
VRERCGRVAH LINKMAEQTR SNTNINVIPM RYGC
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