Gene Ssed_2252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2252 
Symbol 
ID5611892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2715661 
End bp2716023 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content44% 
IMG OID640933162 
Productglobin 
Protein accessionYP_001473989 
Protein GI157375389 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.457276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATA CAAGTTTGTA TGAGCGCTTA GGTGGAGAGG GAAAGATTGC GCTTATTGCT 
GCCGATATTT TCGATACCCA CGCAGCTAAC CCAACAATTG CCAGCCGATA CAAAGATTCA
GATAGAGATA GAGTCATTAA GGTTGTCACC GAGTTTCTCT GTTCGGGTAC CGGAGGGCCG
CAAGATTACA CCGGCAAGAA TATGCTGGAT GCACATAGAG CGATGAACAT TAATGAACGT
GAATATATGG CTGTACTGGA CGACATCATA GTGGCGTTGG ATAAAAATGG TGTTGGAGAG
CGAGAAAAGC AAGAGATGTT GATGATTGCT TATTCTATTA AGGAAGAGAT CATCGGCGTT
TAA
 
Protein sequence
MSDTSLYERL GGEGKIALIA ADIFDTHAAN PTIASRYKDS DRDRVIKVVT EFLCSGTGGP 
QDYTGKNMLD AHRAMNINER EYMAVLDDII VALDKNGVGE REKQEMLMIA YSIKEEIIGV