Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2252 |
Symbol | |
ID | 5611892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2715661 |
End bp | 2716023 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640933162 |
Product | globin |
Protein accession | YP_001473989 |
Protein GI | 157375389 |
COG category | [R] General function prediction only |
COG ID | [COG2346] Truncated hemoglobins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.457276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATA CAAGTTTGTA TGAGCGCTTA GGTGGAGAGG GAAAGATTGC GCTTATTGCT GCCGATATTT TCGATACCCA CGCAGCTAAC CCAACAATTG CCAGCCGATA CAAAGATTCA GATAGAGATA GAGTCATTAA GGTTGTCACC GAGTTTCTCT GTTCGGGTAC CGGAGGGCCG CAAGATTACA CCGGCAAGAA TATGCTGGAT GCACATAGAG CGATGAACAT TAATGAACGT GAATATATGG CTGTACTGGA CGACATCATA GTGGCGTTGG ATAAAAATGG TGTTGGAGAG CGAGAAAAGC AAGAGATGTT GATGATTGCT TATTCTATTA AGGAAGAGAT CATCGGCGTT TAA
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Protein sequence | MSDTSLYERL GGEGKIALIA ADIFDTHAAN PTIASRYKDS DRDRVIKVVT EFLCSGTGGP QDYTGKNMLD AHRAMNINER EYMAVLDDII VALDKNGVGE REKQEMLMIA YSIKEEIIGV
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