Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2231 |
Symbol | |
ID | 5612364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2691715 |
End bp | 2692197 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640933141 |
Product | bacterioferritin |
Protein accession | YP_001473968 |
Protein GI | 157375368 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2193] Bacterioferritin (cytochrome b1) |
TIGRFAM ID | [TIGR00754] bacterioferritin |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.704713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGGCA ATCAGAAGGT TATAGACCAC CTTAATCAAC AATTGACCCT AGAGTTAACC TCGATGGACC AATATCTTGC TCATTCCAAG ATGTACGAAG ATTGGGGTAT TAACAAACTA CACGAAAGAC TGTCCCATGA GTACGAGGAG GAACTTGGTC ACGCTAAACG ATTAGCAGAG CGGATCCTCT TTCTGGAAGG AACACCGGAC ACCGCATCCC GAAAGCCTAT TAACGTGGGC AGTAATGTGC AACAGATGCA CGAAAATGAT CTTGAAGCTG AAAGGGTCGT TGCAGCCAGT CTAACCAAAA TTATCACCAT CTGTGAAGAA GAGAAGGACT ATGTCAGTCG TGAGATTTTA GAAGACTTAT TGGAAGATAC CGAGATGGAT CATATTTACT GGCTGGAACA ACAGTTAGGC TTAATCGATA AGATTGGTAT CCATAACTAT ATCCAATCCC AGATGGGAAG TCAGGATAGT TAA
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Protein sequence | MQGNQKVIDH LNQQLTLELT SMDQYLAHSK MYEDWGINKL HERLSHEYEE ELGHAKRLAE RILFLEGTPD TASRKPINVG SNVQQMHEND LEAERVVAAS LTKIITICEE EKDYVSREIL EDLLEDTEMD HIYWLEQQLG LIDKIGIHNY IQSQMGSQDS
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