| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2186 |
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| Symbol | |
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| ID | 5613374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2646655 |
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| End bp | 2647257 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933090 |
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| Product | hydrolase |
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| Protein accession | YP_001473923 |
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| Protein GI | 157375323 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.549707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTGT CTCCAATCTC TATCGAGTCG ATGGTAGATA AAATCAGAGA AGATCTTGGT
GATAGAAGTC CTGTCAACAT CATAGCCATC TCTATGGGAG GCATGATTGG CTTGCGGTGG
GCTGCAATGT ACCCGGATGA GATCAATAGC GTGATCTGTA TAAATACCAG TGCCAAAAAT
TATTCCGGTT TCCATCATAG GTTAAGTCCG AAAAATTATT TTAAAATCAT CAAGGCTGTA
TTCTCAAATG TGGAGCGACG AGAGAAGGCT ATCTATAGTC TGGTTTCAAA CCGGAGTGAA
AGCACCAAAA CAATCGATGA TTGGATTAGT TATGCAGAGG AGTACCCAAT CAGAAAAAAC
AACTTTTTCA GGCAGTTATT GGCAGCGTTC AGGTTTGACA TCACAAGGCC TGTGAGTTGC
AGACTGCTAT TTATATCATC CCTCAATGAT AACCTGGTTA GCCATGATGC TACTAAGGCA
ATAGCGGATA AATGGCATGA GCCATTGCTT GTGAATACGG TTGCCGGTCA TGATATACCA
CTGGATGATC CTCAATGGTT ATGTGACAAG GTAGAGAGCT TCCTAACCAT GTCTTCATGT
TAG
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| Protein sequence | MELSPISIES MVDKIREDLG DRSPVNIIAI SMGGMIGLRW AAMYPDEINS VICINTSAKN
YSGFHHRLSP KNYFKIIKAV FSNVERREKA IYSLVSNRSE STKTIDDWIS YAEEYPIRKN
NFFRQLLAAF RFDITRPVSC RLLFISSLND NLVSHDATKA IADKWHEPLL VNTVAGHDIP
LDDPQWLCDK VESFLTMSSC
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