| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2166 |
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| Symbol | |
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| ID | 5610971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2619453 |
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| End bp | 2622635 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933070 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001473903 |
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| Protein GI | 157375303 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGATA CAAACAGAGG CATCATCTCC TGGTTTGCGC GCAACAGTGT CGCGGCGAAC
CTTCTGATGC TCATCATTAT ATTAGGTGGT CTCTTGACCG CCGATACCAT ACGTAAACAG
TTTTTCCCTC AGATAGAGAT AAACTGGGTT GAATTTAATG CTTTCTACCC GGGAGCCGCC
CCACAGGAAG TTGAAGAGGG GATCACAATA AAAGTCGAAG AGGCGCTCGA GAGTGTTCAG
GGGCTTAAAC GTGTGATCAC CTACTCAAAT CGTAATTCGG CCAGGGGTTA CTTCCGAATA
GAAGATTCTT ACGACCCTCA GATAGTACTG GATGAGATAA AATCAGAGAT CGATTCAATA
TCCAGTTTCC CCGATGGCAT GGAGCGACCT AAGGTTGAAC GGATAAAACT GCGTCAAGAA
GTACTCTACA TGAGCTTATA TGGTGATATG ACACCGAGGC AGCTCAAAGA GTTAGGTGAA
AAGATCCATG ATGAATTGAT GCAACTTCCA CTGGTCAATA TTACCGATTT CTACGGTGGG
CTCGACTATG AGATCGCCAT CGAGGTCAGT AAAGACAGGC TTCGGGAGTT TGGTCTGAGC
TTTAACGACG TTGCCGCCGC GGTCAGAGGG TTTTCCCGCA ATATGTCGGC AGGACAGATA
AGAGCCGAAA ATGGTTATAT TAACCTACGA GTTCAAAATC AGGCCTATGT GGGATACGAA
TTTGAAAATC TGCCACTGAT CACACTCGAT GATGGAACCA CAGTACTGCT GGGCGATATC
GCAACGGTTA TCGATGGATT CCAGGAAGGG ATCCAATACT CTAAGTTTAA CGGTAAAAAC
TCAGTCACTT TCTTTATCGG CGCCGCTAAC GATCAGAGCA TGACCGATGT CGCGGATGTG
GTGAAAGCTT ACGTAGCCAA GAAACAGGAA GTATTGCCTG AAGGGCTTAA ACTCGAGACC
TGGGTCGACA TGACCTACTA TCTGGAAGGT CGACTGGACT TGATGTTAGA TAGCATGAAA
ACCGGTGCCG TCTTAGTATT TTTGATGCTC GCACTATTTC TGCGCGTCCG TCTCGCATTC
TGGGTGATGA TGGGACTACC GGTCTGTTTC TTGGGTACCT TGCTATTTAT GCCTATGGCC
ATGATAGATG TTACCGTTAA CGTCATCAGC CTGTTCGCCT TTATCTTAGT CTTGGGTATC
GTCGTCGATG ACGCCATCGT CATGGGCGAG AGTGCCCATG AAGAGTGCGA ACAAAGTGGG
CAGAGCCTTG ATAATGTCAT CCGCGGGGTT AAACGCGTTG CCATGCCCGC CACCTTCGGC
GTACTGACAA CCATAGCCGC ATTTTTACCC CTGACGATGG ACGATGGTCC CTCCTCCGCC
TTCGGTAAAG CTATCGGCTA TATCGTTATT CTGTGTCTGA TATTTTCATT GGTCGAGTCA
AAACTTATCT TGCCGGCCCA CCTGGCGCGG ATGAAGAAAA AGACCATAGT CAAACCGGGC
TCTAAAAATC CGATAGATTG GCTACGAAAC GGCGTCAATT TCGTCCAGGG TAAAGTCGAC
TCAAACCTGA AAAAAATGAT CCAGAACGTC TATAGACCCA CGCTGACCAT GGCAGTCGAG
TACCGCTATA CGGTTATCAT GTTGTTCATC AGCTTCGTAC TGATCTGCGC CGGTTTATAC
GCGGGCGGCA TGATACGTTT CATCGGACAG CCTAAGATCC CCCATGACTT CCCACGCGTC
ACCTTTGAGA TGAATGTGGA TGCTTCTGAG AAAGCGACGC TATCTGCGGC TTTGGCAATA
GAAAAAGCCA TCTATAACGT CGATAAGCAG CTCGAAGAGA AATATGGCCA GGGTATGATC
TCCGATATGC AGGTCGATCT CGAGGGACGT ACCTCGGCAA AAGTAATGAC CAAGTTGGTC
GACCCTGAGA TAAGACCACT CGATACTTTC GAACTGGCGG AGATGTGGCG TAAAGCCATG
CCCCTTATCC CGGGAATGAA ATCATTCGAA GTTCAGGACA ACCTGTTTGG CGGTGGTCGT
GACGATGGCG ATATCAGTTT CCGTCTCGAA GGAAAAAACG AAGAGCAACT CGTCGCCGCA
TCGCAGGAGC TTAAGGCAAA ACTGAACTCA CTCAAGGGGG TTGGTGATGT CAACGACAGT
CGACAGTCCA GCGCTAAAGA GGTGCAGTTC GAGCTTAAAC CGCAAGCTTA TGGTTTGGGG
CTTACCTTAG CCAATATCGC CTCACAGGTC GGCAATAGTT TCTATGGCCT GGAAGCACAG
CGGATCTTAA GAAACGGTGA AGAGATAAAG GTGATGCTCC GCTACCCTGA AGAGCAGCGT
AACTCTATCG CTCAGGTATC CGAGGTATTG ATTGTGACGC CTCAAGGCGC CGAGGTACCT
CTGTCGGAGG TCGCGAATAT CACGGTGACA CAAGGTGTGA ATGGTATTCG TCGTGAGAAC
GGTAACCGGA CAATTAATGT CTGGGCCTCT GTCGATGCCG ATCAAGCCGA GCCATTTAAG
CTGGCTCAGG ATATCCGCGA CAACTTTATG CCTCAGCTAT TGAAGAAATA CCCGAGAGTG
AAGAGTGAAG TCTCGGGCAA TATTCAAGAG CAGATGGACA GCGCTAAGAC TCAGTTACGT
GACTTCATCA TATCCTTGCT GATCATCTAT AGCTTACTGG CAATACCGCT AAAATCTTAT
TCACAACCTC TTATGATCAT GGCCGTGATC CCATTTGGTG TGATTGGCTC AGTACTCGGT
CATATGATTA TGGACATCGA TCTCAGTGCC CTGTCGCTGT TCGGTATTAT TGCTGCGGCG
GGTGTGGTGG TGAATGACTC TCTGGTGATG GTCGATTACA TCAACAAGTC CAGAGAGTCC
GGCATAGCGA TGAAAATAGC GGTGCTGGAA GCGGGGTGTC GACGATTCAG AGCCATCATG
CTGACCTCTC TGACCACCTT CATCGGTTTG ATGCCAATCA TGACTGAGAC CAGTATGCAG
GCCAAGATGG TGATCCCGAT GGCAACCTCA CTCGCCTTCG GCGTGCTGTT TGCGACGGTG
GTTACATTGA TGCTGATCCC ATGTCTCTAT CTTGCTATCG AGGACATTAA GAAACTGTTT
GGCAGTAAAT CACGAGCCCA CCATGAAGCA GATCATGGAA TGGAGCCAGA GCTAATCAAA
TAG
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| Protein sequence | MPDTNRGIIS WFARNSVAAN LLMLIIILGG LLTADTIRKQ FFPQIEINWV EFNAFYPGAA
PQEVEEGITI KVEEALESVQ GLKRVITYSN RNSARGYFRI EDSYDPQIVL DEIKSEIDSI
SSFPDGMERP KVERIKLRQE VLYMSLYGDM TPRQLKELGE KIHDELMQLP LVNITDFYGG
LDYEIAIEVS KDRLREFGLS FNDVAAAVRG FSRNMSAGQI RAENGYINLR VQNQAYVGYE
FENLPLITLD DGTTVLLGDI ATVIDGFQEG IQYSKFNGKN SVTFFIGAAN DQSMTDVADV
VKAYVAKKQE VLPEGLKLET WVDMTYYLEG RLDLMLDSMK TGAVLVFLML ALFLRVRLAF
WVMMGLPVCF LGTLLFMPMA MIDVTVNVIS LFAFILVLGI VVDDAIVMGE SAHEECEQSG
QSLDNVIRGV KRVAMPATFG VLTTIAAFLP LTMDDGPSSA FGKAIGYIVI LCLIFSLVES
KLILPAHLAR MKKKTIVKPG SKNPIDWLRN GVNFVQGKVD SNLKKMIQNV YRPTLTMAVE
YRYTVIMLFI SFVLICAGLY AGGMIRFIGQ PKIPHDFPRV TFEMNVDASE KATLSAALAI
EKAIYNVDKQ LEEKYGQGMI SDMQVDLEGR TSAKVMTKLV DPEIRPLDTF ELAEMWRKAM
PLIPGMKSFE VQDNLFGGGR DDGDISFRLE GKNEEQLVAA SQELKAKLNS LKGVGDVNDS
RQSSAKEVQF ELKPQAYGLG LTLANIASQV GNSFYGLEAQ RILRNGEEIK VMLRYPEEQR
NSIAQVSEVL IVTPQGAEVP LSEVANITVT QGVNGIRREN GNRTINVWAS VDADQAEPFK
LAQDIRDNFM PQLLKKYPRV KSEVSGNIQE QMDSAKTQLR DFIISLLIIY SLLAIPLKSY
SQPLMIMAVI PFGVIGSVLG HMIMDIDLSA LSLFGIIAAA GVVVNDSLVM VDYINKSRES
GIAMKIAVLE AGCRRFRAIM LTSLTTFIGL MPIMTETSMQ AKMVIPMATS LAFGVLFATV
VTLMLIPCLY LAIEDIKKLF GSKSRAHHEA DHGMEPELIK
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