| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2164 |
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| Symbol | |
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| ID | 5610005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2615962 |
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| End bp | 2616774 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933068 |
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| Product | ABC transporter related |
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| Protein accession | YP_001473901 |
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| Protein GI | 157375301 |
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| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACAA AATTTCAGTC TAACTCTCAC ATGGAAGTTA ATCACCTGAG TTGGGCAACT
TCATCTAAGA AGGTGCTCGA CGACTTAAGC TTCACCATCG AAAGAGGCGA TTTTGTCGGC
ATCTTGGGAC CCAATGGTGT TGGAAAATCA TCCTTGTTGC GCTGCATGTA TAAGTACATG
AGTCCCGATA GTGGCAAGGT ATTCCTTAAT AACCAAAATA TCGACTCGAT TTCACATCGG
GAGTTCGCCT CGAAAGTCGC CGTGGTGTTA CAACACACCC ATGTAGGCTT CTCGATGACT
GCAAGGCAGT TATTGGCGAC CGGTTTGATA AACCAGCAAA AATGGTGGCA GCGCATCGAC
CACAACGCTG AGAAGGTGGA GATTGACCGC GTCTTGTCGC TTGTGGATCT GACCGATAAA
GCCGAACAGG TTTTTGAGTC ACTTTCCGGT GGCGAGCAGC AGAGGTTGCT GATCGCCAGA
GCGCTACTGC AAAAACCTGA GATCTTACTC CTCGATGAGC CAACCAATCA CCTCGATGTC
GGGTATCAGG TTGAGATCTT AAAACTGATA AAAAGCCTGG ATATCACAGT CGTAGCCAGC
ATTCACGATC TTAATCTTGC CAGTGCCTTT TGCGATAAGC TTCTTCTTCT CCGGGAGGGC
AAACTGATAA AGCACGGCAC TCCTGCGCAG GTGTTAACCC CTGCAAGTAT CGAAAATATT
TACGGTATTA AAACCGAGGT GGACAGACAC CCAAAAGGCA CTCATCCCAG GGTCACCTAC
CACTTCGACG GGGTACGCCA TGCGGCTGTT TAA
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| Protein sequence | MPTKFQSNSH MEVNHLSWAT SSKKVLDDLS FTIERGDFVG ILGPNGVGKS SLLRCMYKYM
SPDSGKVFLN NQNIDSISHR EFASKVAVVL QHTHVGFSMT ARQLLATGLI NQQKWWQRID
HNAEKVEIDR VLSLVDLTDK AEQVFESLSG GEQQRLLIAR ALLQKPEILL LDEPTNHLDV
GYQVEILKLI KSLDITVVAS IHDLNLASAF CDKLLLLREG KLIKHGTPAQ VLTPASIENI
YGIKTEVDRH PKGTHPRVTY HFDGVRHAAV
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