| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2158 |
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| Symbol | |
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| ID | 5612022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2611259 |
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| End bp | 2612335 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640933062 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473895 |
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| Protein GI | 157375295 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.531201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA TCTGTTTTAA TATCTTAAAC GGCGCGGCGA CCCATCTTCC CGGTCTCCAT
CAACTCTCCG ATGCGGGCGT GGGCCAAAAC CTTATGCACC TCACTCCCAC CAGAGATAGT
GAGCTTATCA CCTCCGGCCA AAGCAAGACG CCCCTGCCCG GGATACAGCT AAGCGGTGAT
GGTCTGCTCT CTAATCGCGG CGTCAGCCCG GCTGTCCTGA CCCGAGGTCT GCTTAGAATG
TTTTACAAGG CTGGCTACCG GATAGAGTTT AATAGCTTCA ACTTCAATGT GCCTCAGCCT
CAGGTCGAGT CGCAAGAATG GCTCAGTGTT AATCAGCACT TTGGCGGCAT CAATAGCGAC
ACCGATAACT TAGTCAATGA ACATCTTCTG CCAACTCTTA CTTCTCAGGC AGAACGTAAC
TGCATCAGCA TCCTGGCCGA ATGCGGCGTC GGAGGCACGA CATTTTCCAC ACTCTGGCTG
AGACTGCTGA CCGGCTTACG CCTCTCTCCG GCGGGCAGCA CACTGGACAA ACAGAAGTTA
GCCAGTAAAT CCGCAATATT GACACAGCTT GAGCAAGTGT ATCTTCATGA CAATGAAAAG
TTTGAGCTGG ATATACTTCT GGCGGATACG CAATTTCATG ACGAAATTCA ACAAGCCATC
TGTGGTCTTG TTCGTCAGTG GCCCGCTCAC TTGCCGCTAC CCCAGTTTGC CGGCGGCATG
ATGTTTGTAG CACCACTGTT AGGCGCAAGA CGAGCACAAG AGTTCAAACA AGCCGTCACC
ATTTCTACAA CACGCTGGGT ACTCAAGGGC GACGGGCTTC ACATCATAAA ACACTTAGGC
GATGACGATG TCATTAACGC CAATAACACC AGTTTTAATG CCTCTGTAAT GGACTGTCTC
AATGTCTATG AGCAGGGGCA AGTGGTCGAA GGCTGCGGTC TGGGAGGCTG TCTGGTACTT
GCCGAAGAAC TGGGGTGGAG TGAGCAGGTA ATCATCGAGT CACTGGAACA GGCCGTTCAC
TGTCATCTTA ATAATTTCTT AGATAAAAAC CTGTCATTAA AGGAAAACGT TGCATGA
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| Protein sequence | MKTICFNILN GAATHLPGLH QLSDAGVGQN LMHLTPTRDS ELITSGQSKT PLPGIQLSGD
GLLSNRGVSP AVLTRGLLRM FYKAGYRIEF NSFNFNVPQP QVESQEWLSV NQHFGGINSD
TDNLVNEHLL PTLTSQAERN CISILAECGV GGTTFSTLWL RLLTGLRLSP AGSTLDKQKL
ASKSAILTQL EQVYLHDNEK FELDILLADT QFHDEIQQAI CGLVRQWPAH LPLPQFAGGM
MFVAPLLGAR RAQEFKQAVT ISTTRWVLKG DGLHIIKHLG DDDVINANNT SFNASVMDCL
NVYEQGQVVE GCGLGGCLVL AEELGWSEQV IIESLEQAVH CHLNNFLDKN LSLKENVA
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