| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2146 |
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| Symbol | |
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| ID | 5610535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2597657 |
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| End bp | 2598550 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640933050 |
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| Product | ABC-type Fe3+-hydroxamate transport system periplasmic component-like protein |
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| Protein accession | YP_001473883 |
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| Protein GI | 157375283 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.543136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.254057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGA TAAAGATAAT AATCTGCCTG TTACTACTAC TCGGGCCCCA CACGGTATTC
AGCCAGGAGG GACAAGAACT CAGAATCGTC TCCCTTGCTC CTAACTGGAG TCATACCGTT
GCAGAGATTG GTGCCATCGA TGACTTAGTG GGCGTTACAC GCTATGCACG ATTTCCGGCA
GAGTTGCCTT TGAGAGTCCA GCAGAAACGT ATCGATGTGG TCGGTGGCTT CACGGATATC
TCCATCGACA AGATTACCCG GCTCGATCCG GATCTGGTGC TTACCGCCAC AGGCTTACAA
CTGAGGTTAA AAGCTAAGTT ACAGGAGTTA GGAATAACCG TTATCCATAT GGAGGAGTCC
AGCTTAGAGG AGGTGTACGC TAAGATCTCA TTACTCGGCA AGACCATAGA TCATCAACAA
CAAGCCGACG AGCTGGTAGC GTCGATAAAG AGCGAGTTGA AGGAGATAGC GGCCGAGTTC
ACGGAGCAAG ACTCACCCGA GGTCTACTAC GAAATAAACT ACCTCTATAA ATGTGTGCCG
GGTAAACACT CCTATATGAC CGAGCTGATT GAGCTGGTGG GTGCTAAACC GATCTTTTCC
CATCGCGACG GCATAGCCCC TATGGTCACC TGGCCCGAAG TGGTCAAACA AAACCCGGAT
GTTATCTTAT TGCCGATGTG GCCCGATGCT ACGGGACCTG TATTCGAGGG GCCACAAGCG
GGAAGCGGCA CCACCACCAT AGCCGAGGTT TATTCCCGGG AAGATGCAGA TAAGGTTAAC
GCCGTAAACA ACAATGCCGT CAGGTTTATC GACTCGGCCG TCACCAAGCA AGCAGGCCCA
AACATCCCAC AGGCCGCCAG GCTGCTTGCC GAGGCGATAT ACGCACAGCA GTAA
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| Protein sequence | MRAIKIIICL LLLLGPHTVF SQEGQELRIV SLAPNWSHTV AEIGAIDDLV GVTRYARFPA
ELPLRVQQKR IDVVGGFTDI SIDKITRLDP DLVLTATGLQ LRLKAKLQEL GITVIHMEES
SLEEVYAKIS LLGKTIDHQQ QADELVASIK SELKEIAAEF TEQDSPEVYY EINYLYKCVP
GKHSYMTELI ELVGAKPIFS HRDGIAPMVT WPEVVKQNPD VILLPMWPDA TGPVFEGPQA
GSGTTTIAEV YSREDADKVN AVNNNAVRFI DSAVTKQAGP NIPQAARLLA EAIYAQQ
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