Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2133 |
Symbol | |
ID | 5610640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2581300 |
End bp | 2581515 |
Gene Length | 216 bp |
Protein Length | 71 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640933036 |
Product | DsrH family protein |
Protein accession | YP_001473870 |
Protein GI | 157375270 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03011] sulfur relay protein TusB/DsrH |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.04039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0139279 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAC AGGACTCGAT ACTGTTGTCC GGAAATGGCG TGAATAGTCT CTTATTGTCA CAGTGGCGAG AAAGACTAGC CAATATCAGG GTCATGTTAC TCATCGACGA TGTCGAAGCT CGTGGATTGA GCCAGCGGTT TGAAGACTAT ACCCTTATCG ACTACGACAC ATTCGTAAAA GAGTCTTTAA CGCATGACAA GGTGATCACT TGGTGA
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Protein sequence | MDKQDSILLS GNGVNSLLLS QWRERLANIR VMLLIDDVEA RGLSQRFEDY TLIDYDTFVK ESLTHDKVIT W
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