| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2098 |
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| Symbol | |
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| ID | 5610275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2538866 |
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| End bp | 2539675 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932995 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473835 |
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| Protein GI | 157375235 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.591796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGTA CACCGCCACC ACCGGGCATG CATTATCGCA TGTACAACAC TTGGTACAAT
GCCGATACCA TCAATGATGA TCGCGGTGAT GATTCTGGTT TAGATGTCGA TTTAGATGTG
TTTTCACAAG TACACAGAAT CGTACACGTA ACAGAAAAGA AAATCTTTGG GGCTAACTGG
GCCTACAACG TTCTGGTTCC TATGGTCAAA ACAGATATAT CAATAGCGCC TATCGGCGTT
AACGACTCCA GTTCGTTCTC TGTTGGCGAC ATAGTGTTAG AGCCGTTAGC CCTGTTTTGG
TATCAGGAAA ACTATGAGGC GGCACTTGGA CTGGCACTTA TCGCCCCGAC GGGTGATTAC
GACTCAACAG ATGCTGCATC TCCGGGCAAG GGCTATTGGT CAGGAATGAT GACTCTGGGT
GGCACCTACT ATCTGGACTC AGAGAAATCC TGGTCAGTCA GCGGCCTGAC CCGCACCATA
ATCAATGGAG AGCAGGATGA AACAGATGTT CGTCCTGGTT CTGAATTCAC TATTGAAGGT
GGTATAGGCA AACAATTTAT GCTCGATCAT ACCTGGCTTA TCCGTCCCGG TATCAGTTAT
TGCGCGACAT GGCAGATCAG TGACGACAGT CAAGATGGTC ATGGCACCGT GGCTGATGAA
AGAAAAGAGG GGTATGGCAT TGGTGGTGAG CTGAACGTAA TGTATTTACC TTGGCTGTTA
CAAGGCAATA TTCGTTACAC CAATGAATTT GGTGCAAAGA ACATGACCGA AGGGTCATCG
GTGGTATTTA CACTGACAAA ATCTTTCTAA
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| Protein sequence | MAGTPPPPGM HYRMYNTWYN ADTINDDRGD DSGLDVDLDV FSQVHRIVHV TEKKIFGANW
AYNVLVPMVK TDISIAPIGV NDSSSFSVGD IVLEPLALFW YQENYEAALG LALIAPTGDY
DSTDAASPGK GYWSGMMTLG GTYYLDSEKS WSVSGLTRTI INGEQDETDV RPGSEFTIEG
GIGKQFMLDH TWLIRPGISY CATWQISDDS QDGHGTVADE RKEGYGIGGE LNVMYLPWLL
QGNIRYTNEF GAKNMTEGSS VVFTLTKSF
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