| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2071 |
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| Symbol | |
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| ID | 5611541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2509511 |
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| End bp | 2510209 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932968 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473808 |
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| Protein GI | 157375208 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
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| TIGRFAM ID | [TIGR01198] 6-phosphogluconolactonase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000857117 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00314891 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATTAAAG AAAGTGTGTT CAAATCTTTT GATGATAAAT CATCACTGGA AATCCAGCTT
GCAGAGCGAA TTGCTAAGCA ACTACAGGAA GCCGTTGATA CCCGCGGCAA GGCGAGTCTG
ATTGTCTCCG GCGGTTCGAC ACCGCTTAAG CTGTTTCAGT TACTGAGTAA GAAAAGCATC
GATTGGTCTG AAGTCTATAT CACCCTTGCC GATGAGCGTT GGGTTGATAA TGACGCAGAT
GCTTCAAATG AAAAGTTAGT CAGGGAGCAC CTGTTACAAA ACAGAGCTTC CAATGCCAAG
TTTCGTGGCT TAAAAAATAT GTTTTCCTCT CCAGAAGAGG GATGCCTCAT GGCTAGCGAA
CAGTTGGCCC ATTTCCCACG TCCATTCGAC GTAGTGATTC TGGGTATGGG CAACGACGGA
CACACATGTT CTTGGTTCCC TTGCTCTGAA GAGATAGATA CAGCCTTAAA TACAGAAGAT
GTGTGTGTGG CGGTCAATCC TGTCAGTGCT CCGAACCCTC GATTGTCGTT ATCGAAAACC
GCGATATTAG CCAGTCGTCA AATTTATTTA CACATTGTAG GTGAGCAGAA ACTCTCTGTT
TATCGTCAAG CGCTTGAAAA TGAAGATGCT AACAGCATGC CGATCAGAGC CGTCTTAGCT
CAGCATAAGA CACCGGTCGA CGTTTACTGG AGCGCTTAA
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| Protein sequence | MIKESVFKSF DDKSSLEIQL AERIAKQLQE AVDTRGKASL IVSGGSTPLK LFQLLSKKSI
DWSEVYITLA DERWVDNDAD ASNEKLVREH LLQNRASNAK FRGLKNMFSS PEEGCLMASE
QLAHFPRPFD VVILGMGNDG HTCSWFPCSE EIDTALNTED VCVAVNPVSA PNPRLSLSKT
AILASRQIYL HIVGEQKLSV YRQALENEDA NSMPIRAVLA QHKTPVDVYW SA
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