| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2060 |
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| Symbol | |
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| ID | 5611689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2496175 |
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| End bp | 2496774 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640932957 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473797 |
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| Protein GI | 157375197 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3531] Predicted protein-disulfide isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0138682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCAG ATCTATATTT TATCTACGAC TCCCATTGTC CTTGGAGTTA CGCGGCCACA
CCTGTGGTTA ATGCACTCAG TGAAGCTTAC CCTGAAATGA ATATTCACAC GCTTCATTGT
GCCCATTTCA ACGGCAGTGA CAGTGCGGGT CAGGAGCAAG TGGACGCAGT GTTGAAATTG
AGTGCGGTTA AGTTTGGCAG AGAACATATT CGCTATGTAA ATAGCCCCAA GAATGCCATT
AAAACTGCCA ATTTAATGGC TTGGATGCAA AATAAGCAAC CTGACAAAAT GTTACCCGTA
CTCAATGCAT TACAAAAAGC ACATTTTATC GAAGGTAACC CTCTGGATTG TAAGCATGAT
TTCACTAATA TTCTTGAACA GTTTAAATTG TCACCATCGA ATAAAGTCTT CAGAGATGAG
TTAAGCAGTG ACGCAGAATA TATTCTTGAA GATATCGGTG AGATCCAAGA GATGATTGGA
ACTGTGGCAT TTCCAGTGCT CTTGTTGTCA ACCGAAGACA AAGGCGTCTT CATCGATCAC
TCCTTGTATT TAGGCAAACC TCAAGCAGTT GTTGAAGCGG TAAAACAAGA GCTAAGCTAG
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| Protein sequence | MTSDLYFIYD SHCPWSYAAT PVVNALSEAY PEMNIHTLHC AHFNGSDSAG QEQVDAVLKL
SAVKFGREHI RYVNSPKNAI KTANLMAWMQ NKQPDKMLPV LNALQKAHFI EGNPLDCKHD
FTNILEQFKL SPSNKVFRDE LSSDAEYILE DIGEIQEMIG TVAFPVLLLS TEDKGVFIDH
SLYLGKPQAV VEAVKQELS
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