| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2002 |
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| Symbol | |
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| ID | 5611460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2422678 |
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| End bp | 2423445 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932888 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473739 |
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| Protein GI | 157375139 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.50743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000157638 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGTCTATCG GTAAACGACT CGTACTGGCA ACGAATTTAT TATGCTTTAG CTTTTTCCTA
AGCGCTGAGC CCGGGCCCCT GACGCCACAC ACGGCCGAAT ATCAGGTCAA TTATGGAAGC
ATAGAACTTG GGAAAGCCAG GTACCAGCTG CCAAACGCCG AGGGAAACCT TTATCATTAT
CGTTTTGACA GTGATGTCAG CTTATTAGTT CTATCCGATA GAAGAAATGT AGTCAGTGAC
TTCACCCTAA AAAATCAACA GCTTACTCCT ATGCGTTATA TCCATAACCG TAAAGGCACA
GGCCCCAGTT ATCAGGAACA AGCTGCCTTT GCCAAGGGGC AAGAGGTGGT TCACAGTCGC
TATAAAGATG AGAGAGCAAA ACTGCCCTAC ACCGATATTT TATATGATCC CTTAATGGTA
CAACTGCAAT TTCGTCTCGA CTTAGCTCAG GGTAAGAAAG AGTTGCACTA CGTCATGGTG
AAAAGCGGAG AACTCGATGA GTACGATTTT AAAGTGGTCG GAAAAGAGAG AATGAACATT
GAAAGTGGCA GTTATGAGAC CATCAAGATC GAGGTGATCA GGGATAACAC AAAGAGGCAG
ACCTTTTTTT GGATGGCGCC CAAATTAGGC TACCTTCCGA TTCGTCTGAC TCACTTCGAA
AAGGGTAGCA AGCAACTCGA TATTAAATTA CTCAGTTATC AATTCGCTCA AGAACAGCAA
ACCGTCAACG CCGAGCCATT GAGCTCCAAG GTTATCACGC CACTATAA
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| Protein sequence | MSIGKRLVLA TNLLCFSFFL SAEPGPLTPH TAEYQVNYGS IELGKARYQL PNAEGNLYHY
RFDSDVSLLV LSDRRNVVSD FTLKNQQLTP MRYIHNRKGT GPSYQEQAAF AKGQEVVHSR
YKDERAKLPY TDILYDPLMV QLQFRLDLAQ GKKELHYVMV KSGELDEYDF KVVGKERMNI
ESGSYETIKI EVIRDNTKRQ TFFWMAPKLG YLPIRLTHFE KGSKQLDIKL LSYQFAQEQQ
TVNAEPLSSK VITPL
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