Gene Ssed_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1972 
Symbol 
ID5612485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2382985 
End bp2383251 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content41% 
IMG OID640932856 
Producthypothetical protein 
Protein accessionYP_001473709 
Protein GI157375109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.806101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT CACGCTATAC CGAAACTCAG ATAATTAAGA TCCTGAAAGA AGTTGAAGGT 
GGTCGTCTGA TCAAGGAAGT CAGCCGAGAA TACGGTATTT CAGAGGCTAC CTATTACAAC
TGGAAGAGTA AGTTCGGTGG TATGGAAGCC TCAGACATTA AACGCTTACG CGAGCTTGAA
GATGAAAATC GACGCTTAAA ACAGATGTTT GCAGACATCA GTTTGGAACA TAAGATCCTC
AAAGATCTCG TCGAAAAAAA GCTCTGA
 
Protein sequence
MKKSRYTETQ IIKILKEVEG GRLIKEVSRE YGISEATYYN WKSKFGGMEA SDIKRLRELE 
DENRRLKQMF ADISLEHKIL KDLVEKKL