| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1946 |
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| Symbol | |
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| ID | 5611294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2347133 |
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| End bp | 2347708 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640932830 |
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| Product | cytochrome c553 |
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| Protein accession | YP_001473683 |
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| Protein GI | 157375083 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2863] Cytochrome c553 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.871766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTTA ATAAATTATT TTGCTTACCC ATAATTCTTT TTTCCTTTTA CAGCCTAGCA
GTTGAGAATA AATTAATAGA GGAGTGTGAA ACTTGTCACG GGGAAAACGG TGTTAGCACG
AACAGTACCA TACCCATAAT TTCAGGCTTA GCCGCAGTAA ATATTGAAGA TGCCTTTTCC
ATGTATAAAG ATGGAGAAAG AGAAGCGAAG GATATCGATG GAAATGACAT GACCAAGGTG
GCTAACTCTC TCTCTGAACA AGAGGTATCT GACATTTCCT TGTACTATTC ACACAAGCTC
TTTAAAACGC CTAATCAAGT TTACGATAAA ACATTAGTCA ATGCAGGTAA GAAAATTCAT
CTTGCAAAAT GCGATATCTG CCATTCAGAA GGCGGTACTC TAGCTGACGA CGAAACACTT
ATTCTTGCAG GTCAATGGAC TCCTTATCTT AGAGAGTCGA TTAACTCATT TATCAATGGT
GAACGCTATG GTGATGACAC TATGGTCGAA GAGTTACAAG CTTTATCAGA GAAACATATA
GAGGCCCTAC TCGCCTATTA CGCAAGCCTT AAGTGA
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| Protein sequence | MKFNKLFCLP IILFSFYSLA VENKLIEECE TCHGENGVST NSTIPIISGL AAVNIEDAFS
MYKDGEREAK DIDGNDMTKV ANSLSEQEVS DISLYYSHKL FKTPNQVYDK TLVNAGKKIH
LAKCDICHSE GGTLADDETL ILAGQWTPYL RESINSFING ERYGDDTMVE ELQALSEKHI
EALLAYYASL K
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