Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1943 |
Symbol | |
ID | 5611371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2345093 |
End bp | 2345488 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640932829 |
Product | transposase |
Protein accession | YP_001473682 |
Protein GI | 157375082 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTCA TTGTACACCT GACCATAGTC AGGTATATTC GCTCAGATAC CAACCGTAAA CATGATTTAG TTGATGTAAT ATTCCTTGTC ATCAGTGCAA TTATATCTGG GGCTGAAGGA TGGCAAAATA TTGAAACATT TGGTGATAAT AAATTTTCTT GGTTGTCGAA TCATCGAGCT TTCGAGAATG GTATCCCGCG CCGCCACACG ATTGCTCGCA TTCTACGAAG TATCGTTGCA GAGACTTTAC TTGAAGCTTT ACTCAACTGG GTTAATGACC AACGTACAAT AAATGGAAAA CCCATAATAG CCTTCGATGG AAAAGTGCTT CGAGGTGGCG TTGTTGATCA AATACTCGCT TTATATGTAG CTGTACCGAG CGTTTTACCA AACTAG
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Protein sequence | MTLIVHLTIV RYIRSDTNRK HDLVDVIFLV ISAIISGAEG WQNIETFGDN KFSWLSNHRA FENGIPRRHT IARILRSIVA ETLLEALLNW VNDQRTINGK PIIAFDGKVL RGGVVDQILA LYVAVPSVLP N
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