| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1941 |
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| Symbol | |
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| ID | 5610334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2341000 |
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| End bp | 2342286 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640932827 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473680 |
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| Protein GI | 157375080 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAATA TTTTTGTTTT TGGTGCGGAT GAATTCAATC TTTCTCTGAT GCGGTCTCTC
GAGGCTGCCC GGGAGTATTG TTTTCATGAA CTTTATCAAT ATGCAGAGGT AAAAACAGGA
AAGGAACTTC CGGTCAAAGC CTTGTACGAA GGTGCTCTTG AACGACTGGA AAGGTACCCC
GGTTCTGTGG ATGCCATTGT CGGCTACTGG GACTTTCCGG TTAGCACCAT GCTTCCTATA
TTGTGTCAAT CACAAGGCTT GCCTTCTCCC TGCTTTGAAG CGGTGCTCAA ATGCGAGCAT
AAATATTGGA GCAGGCTGGA GCAACGCCGG GTGGTTCCGG AATTTATCCC CGATTTTTGT
GCCGTTGATC CTTTTAAGGA TGATTATCAG CAGCAGATCA CCCTCGATTA TCCCTTCTGG
CTAAAGCCGG TGAAAGCGGC TTCATCACAC CTCGGGTTTA TGGTGCGTAA TGACAGCGAA
CTCGAAATGG TGATTGAGGA GATACGCAAG AAAATCCACT GCTTTGCAGC GCCGTTCAAC
TACCTGCTGC AATTTGCTGA TCTGCCTGAT GATATCGCCG CTATCGACGG GTATCACTGC
ATCGCAGAAG GGATTATCTC GCATGGGCAG CAATGCACGC TCGAAGGCTA TGTCTTTGAT
GGAAAGCTAT GTGTCTATGG GGCCGTCGAC TCGATCCGCG AAGGTAAGCA TAGTTCGAGC
TTCTCTCGCT ATCAGTATCC ATCATCGATC CCACAGCCTA CCCAAGACAA AATGATCGCC
GTCACCGAGC GCTTTCTTAC CTATATCGGC TTTGATAACG GCCCGTTCAA TATTGAGTAT
TACTGGGAGG AGGAGAGTGA CCAGATTTGG TTGCTGGAGA TCAATACCCG CATTTCAAAG
TCGCATTGTC CATTATTCCG CAACGTCGAT GGCATGTCCC ACCACCAGAT AATGCTGGCT
CTGGCCTTGG GGAAACAGCC AGTGTTCCCC CATCGTCAAG GTCCATATCG GTACGCGGCC
AAGTTCATGT GGCGGGTACA TTCAGATGCT ATGGTTAACA GGGTGCCGAC AGAACAAGAG
GTACAGGCCG TTACCCGCCG CGTCGCCGGT ACTGAGATCC AGCTGCATAT CCGAGAGGGT
ATGCATCTGT CTGAGCTTAA TTATCAAGAC AGTTACAGCT ACGAGATCGC TGAAGTTTTT
ATCGGCGGCG ACAGCGAGCA GGAGTTGTTG CAGAAATACC GTGATGTGCA ACAGGTGTTG
CCGCTGGAGC TTATATCGCT TTCCTAA
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| Protein sequence | MKNIFVFGAD EFNLSLMRSL EAAREYCFHE LYQYAEVKTG KELPVKALYE GALERLERYP
GSVDAIVGYW DFPVSTMLPI LCQSQGLPSP CFEAVLKCEH KYWSRLEQRR VVPEFIPDFC
AVDPFKDDYQ QQITLDYPFW LKPVKAASSH LGFMVRNDSE LEMVIEEIRK KIHCFAAPFN
YLLQFADLPD DIAAIDGYHC IAEGIISHGQ QCTLEGYVFD GKLCVYGAVD SIREGKHSSS
FSRYQYPSSI PQPTQDKMIA VTERFLTYIG FDNGPFNIEY YWEEESDQIW LLEINTRISK
SHCPLFRNVD GMSHHQIMLA LALGKQPVFP HRQGPYRYAA KFMWRVHSDA MVNRVPTEQE
VQAVTRRVAG TEIQLHIREG MHLSELNYQD SYSYEIAEVF IGGDSEQELL QKYRDVQQVL
PLELISLS
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