| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1896 |
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| Symbol | |
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| ID | 5613838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2281988 |
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| End bp | 2282200 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640932782 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473635 |
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| Protein GI | 157375035 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.37242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000312013 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAGAGCA TAGAGCTACT TTCTGAGATC ACCTGTCCCG TATGCGGGCA TCGTAAAACC
GAAGAGATGC CGACCAATGC TTGCCAATGG TATTACGAAT GTACGTCATG TAAAACGCTG
CTAAGGCCGC TTAAAGGTCA CTGCTGCGTA TTTTGCTCGT ATGGTACGGT GAAATGCCCT
CCTGTGCAGG AAGGGAAACC GTGCTGCGGT TGA
|
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| Protein sequence | MKSIELLSEI TCPVCGHRKT EEMPTNACQW YYECTSCKTL LRPLKGHCCV FCSYGTVKCP
PVQEGKPCCG
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